Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn2aA0A0J9YTW6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.66■□□□□ 0.74
Scn2aA0A0J9YTW6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.66■□□□□ 0.74
Scn2aA0A0J9YTW6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn2aA0A0J9YTW6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn2aA0A0J9YTW6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn2aA0A0J9YTW6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn2aA0A0J9YTW6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn2aA0A0J9YTW6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.65■□□□□ 0.74
Scn2aA0A0J9YTW6 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.65■□□□□ 0.74
Scn2aA0A0J9YTW6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn2aA0A0J9YTW6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn2aA0A0J9YTW6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn2aA0A0J9YTW6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.64■□□□□ 0.74
Scn2aA0A0J9YTW6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn2aA0A0J9YTW6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn2aA0A0J9YTW6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn2aA0A0J9YTW6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Scn2aA0A0J9YTW6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn2aA0A0J9YTW6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.63■□□□□ 0.73
Scn2aA0A0J9YTW6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn2aA0A0J9YTW6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.63■□□□□ 0.73
Scn2aA0A0J9YTW6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn2aA0A0J9YTW6 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.63■□□□□ 0.73
Scn2aA0A0J9YTW6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn2aA0A0J9YTW6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn2aA0A0J9YTW6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn2aA0A0J9YTW6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn2aA0A0J9YTW6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn2aA0A0J9YTW6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn2aA0A0J9YTW6 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.62■□□□□ 0.73
Scn2aA0A0J9YTW6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.62■□□□□ 0.73
Scn2aA0A0J9YTW6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.62■□□□□ 0.73
Scn2aA0A0J9YTW6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Scn2aA0A0J9YTW6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn2aA0A0J9YTW6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn2aA0A0J9YTW6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn2aA0A0J9YTW6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn2aA0A0J9YTW6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn2aA0A0J9YTW6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn2aA0A0J9YTW6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Scn2aA0A0J9YTW6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Scn2aA0A0J9YTW6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn2aA0A0J9YTW6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.59■□□□□ 0.73
Scn2aA0A0J9YTW6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn2aA0A0J9YTW6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.59■□□□□ 0.73
Scn2aA0A0J9YTW6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.59■□□□□ 0.73
Scn2aA0A0J9YTW6 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.59■□□□□ 0.73
Scn2aA0A0J9YTW6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.59■□□□□ 0.73
Scn2aA0A0J9YTW6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn2aA0A0J9YTW6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn2aA0A0J9YTW6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn2aA0A0J9YTW6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn2aA0A0J9YTW6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scn2aA0A0J9YTW6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn2aA0A0J9YTW6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn2aA0A0J9YTW6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.57■□□□□ 0.72
Scn2aA0A0J9YTW6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn2aA0A0J9YTW6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn2aA0A0J9YTW6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.57■□□□□ 0.72
Scn2aA0A0J9YTW6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn2aA0A0J9YTW6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn2aA0A0J9YTW6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn2aA0A0J9YTW6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn2aA0A0J9YTW6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn2aA0A0J9YTW6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn2aA0A0J9YTW6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn2aA0A0J9YTW6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.56■□□□□ 0.72
Scn2aA0A0J9YTW6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.56■□□□□ 0.72
Scn2aA0A0J9YTW6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn2aA0A0J9YTW6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn2aA0A0J9YTW6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scn2aA0A0J9YTW6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scn2aA0A0J9YTW6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn2aA0A0J9YTW6 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.55■□□□□ 0.72
Scn2aA0A0J9YTW6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn2aA0A0J9YTW6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn2aA0A0J9YTW6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn2aA0A0J9YTW6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Scn2aA0A0J9YTW6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn2aA0A0J9YTW6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn2aA0A0J9YTW6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn2aA0A0J9YTW6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.54■□□□□ 0.72
Scn2aA0A0J9YTW6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn2aA0A0J9YTW6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Scn2aA0A0J9YTW6 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.53■□□□□ 0.72
Scn2aA0A0J9YTW6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.53■□□□□ 0.72
Scn2aA0A0J9YTW6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn2aA0A0J9YTW6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn2aA0A0J9YTW6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn2aA0A0J9YTW6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn2aA0A0J9YTW6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn2aA0A0J9YTW6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn2aA0A0J9YTW6 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.53■□□□□ 0.72
Scn2aA0A0J9YTW6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn2aA0A0J9YTW6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn2aA0A0J9YTW6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn2aA0A0J9YTW6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.52■□□□□ 0.72
Scn2aA0A0J9YTW6 Gm9959-201ENSMUST00000068277 390 ntBASIC19.52■□□□□ 0.72
Scn2aA0A0J9YTW6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms