Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV22A0A0B4J277 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV22A0A0B4J277 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV22A0A0B4J277 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV22A0A0B4J277 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV22A0A0B4J277 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAV22A0A0B4J277 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV22A0A0B4J277 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV22A0A0B4J277 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV22A0A0B4J277 AC096887.2-201ENST00000623443 1957 ntBASIC13.35□□□□□ -0.27
TRAV22A0A0B4J277 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV22A0A0B4J277 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV22A0A0B4J277 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAV22A0A0B4J277 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV22A0A0B4J277 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 AP003733.4-201ENST00000623785 1697 ntBASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 DYNLL1-208ENST00000550178 581 ntBASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV22A0A0B4J277 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV22A0A0B4J277 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV22A0A0B4J277 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV22A0A0B4J277 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV22A0A0B4J277 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV22A0A0B4J277 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV22A0A0B4J277 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV22A0A0B4J277 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV22A0A0B4J277 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV22A0A0B4J277 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV22A0A0B4J277 STK25-234ENST00000535007 2459 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV22A0A0B4J277 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV22A0A0B4J277 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV22A0A0B4J277 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV22A0A0B4J277 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV22A0A0B4J277 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV22A0A0B4J277 C1orf229-201ENST00000623686 2258 ntBASIC13.32□□□□□ -0.28
TRAV22A0A0B4J277 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV22A0A0B4J277 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV22A0A0B4J277 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV22A0A0B4J277 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV22A0A0B4J277 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV22A0A0B4J277 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
TRAV22A0A0B4J277 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms