Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-7A0A075B6B0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-7A0A075B6B0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-7A0A075B6B0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-7A0A075B6B0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-7A0A075B6B0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-7A0A075B6B0 Gm10420-201ENSMUST00000121713 882 ntBASIC16.37■□□□□ 0.21
Trav6d-7A0A075B6B0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-7A0A075B6B0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-7A0A075B6B0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-7A0A075B6B0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav6d-7A0A075B6B0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-7A0A075B6B0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
Trav6d-7A0A075B6B0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.36■□□□□ 0.21
Trav6d-7A0A075B6B0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav6d-7A0A075B6B0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav6d-7A0A075B6B0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-7A0A075B6B0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.35■□□□□ 0.21
Trav6d-7A0A075B6B0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-7A0A075B6B0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-7A0A075B6B0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav6d-7A0A075B6B0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-7A0A075B6B0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-7A0A075B6B0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-7A0A075B6B0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-7A0A075B6B0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-7A0A075B6B0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav6d-7A0A075B6B0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-7A0A075B6B0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav6d-7A0A075B6B0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-7A0A075B6B0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav6d-7A0A075B6B0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav6d-7A0A075B6B0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Trav6d-7A0A075B6B0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Trav6d-7A0A075B6B0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Trav6d-7A0A075B6B0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.33■□□□□ 0.21
Trav6d-7A0A075B6B0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6d-7A0A075B6B0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6d-7A0A075B6B0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6d-7A0A075B6B0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.33■□□□□ 0.2
Trav6d-7A0A075B6B0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-7A0A075B6B0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-7A0A075B6B0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.33■□□□□ 0.2
Trav6d-7A0A075B6B0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-7A0A075B6B0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-7A0A075B6B0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-7A0A075B6B0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-7A0A075B6B0 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.33■□□□□ 0.2
Trav6d-7A0A075B6B0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-7A0A075B6B0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav6d-7A0A075B6B0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-7A0A075B6B0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-7A0A075B6B0 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.32■□□□□ 0.2
Trav6d-7A0A075B6B0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.32■□□□□ 0.2
Trav6d-7A0A075B6B0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-7A0A075B6B0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-7A0A075B6B0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-7A0A075B6B0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-7A0A075B6B0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-7A0A075B6B0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav6d-7A0A075B6B0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-7A0A075B6B0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav6d-7A0A075B6B0 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.31■□□□□ 0.2
Trav6d-7A0A075B6B0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-7A0A075B6B0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav6d-7A0A075B6B0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Trav6d-7A0A075B6B0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6d-7A0A075B6B0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6d-7A0A075B6B0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6d-7A0A075B6B0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Trav6d-7A0A075B6B0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-7A0A075B6B0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-7A0A075B6B0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-7A0A075B6B0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav6d-7A0A075B6B0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-7A0A075B6B0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-7A0A075B6B0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-7A0A075B6B0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6d-7A0A075B6B0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-7A0A075B6B0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-7A0A075B6B0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-7A0A075B6B0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-7A0A075B6B0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Trav6d-7A0A075B6B0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav6d-7A0A075B6B0 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.28■□□□□ 0.2
Trav6d-7A0A075B6B0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-7A0A075B6B0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-7A0A075B6B0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav6d-7A0A075B6B0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-7A0A075B6B0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-7A0A075B6B0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav6d-7A0A075B6B0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trav6d-7A0A075B6B0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-7A0A075B6B0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-7A0A075B6B0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-7A0A075B6B0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6d-7A0A075B6B0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6d-7A0A075B6B0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-7A0A075B6B0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-7A0A075B6B0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms