Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 UBL7-205ENST00000565130 792 ntTSL 311.05□□□□□ -0.647e-7■□□□□ 8.2
NCBP2P52298 SRP19-207ENST00000515755 631 ntTSL 211□□□□□ -0.657e-7■□□□□ 8.2
NCBP2P52298 UBL7-204ENST00000564488 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.667e-7■□□□□ 8.2
NCBP2P52298 AC008575.2-202ENST00000506997 1643 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.677e-7■□□□□ 8.2
NCBP2P52298 MERTK-201ENST00000295408 3954 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.681e-8■□□□□ 8.2
NCBP2P52298 MERTK-203ENST00000421804 3600 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.691e-8■□□□□ 8.2
NCBP2P52298 MERTK-207ENST00000616902 3104 ntTSL 5 BASIC10.54□□□□□ -0.721e-8■□□□□ 8.2
NCBP2P52298 KIZ-210ENST00000619189 2130 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.751e-8■□□□□ 8.2
NCBP2P52298 GDF15-205ENST00000604609 506 ntTSL 39.19□□□□□ -0.941e-8■□□□□ 8.2
NCBP2P52298 SRP19-204ENST00000505459 2841 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.977e-7■□□□□ 8.2
NCBP2P52298 UBL7-203ENST00000563081 621 ntTSL 38.8□□□□□ -17e-7■□□□□ 8.2
NCBP2P52298 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.011e-8■□□□□ 8.2
NCBP2P52298 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.247e-7■□□□□ 8.2
NCBP2P52298 SPCS2-206ENST00000528265 577 ntTSL 56.35□□□□□ -1.391e-8■□□□□ 8.2
NCBP2P52298 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.647e-7■□□□□ 8.2
NCBP2P52298 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.122e-12■□□□□ 8.2
NCBP2P52298 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.55■□□□□ 0.562e-12■□□□□ 8.2
NCBP2P52298 AP2M1-211ENST00000460862 551 ntTSL 418.33■□□□□ 0.522e-12■□□□□ 8.2
NCBP2P52298 AP2M1-204ENST00000427072 557 ntTSL 418.07■□□□□ 0.482e-12■□□□□ 8.2
NCBP2P52298 AP2M1-214ENST00000466598 684 ntTSL 218.07■□□□□ 0.482e-12■□□□□ 8.2
NCBP2P52298 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.432e-12■□□□□ 8.2
NCBP2P52298 AP2M1-219ENST00000484469 558 ntTSL 316.68■□□□□ 0.262e-12■□□□□ 8.2
NCBP2P52298 AP2M1-220ENST00000487958 796 ntTSL 216.44■□□□□ 0.222e-12■□□□□ 8.2
NCBP2P52298 AP2M1-209ENST00000448139 601 ntTSL 513.54□□□□□ -0.242e-12■□□□□ 8.2
NCBP2P52298 AP2M1-210ENST00000455925 545 ntTSL 413.25□□□□□ -0.292e-12■□□□□ 8.2
NCBP2P52298 ACLY-208ENST00000590735 586 ntTSL 414.45□□□□□ -0.14e-16■□□□□ 8.2
NCBP2P52298 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC11.46□□□□□ -0.574e-16■□□□□ 8.2
NCBP2P52298 ACLY-209ENST00000590770 583 ntTSL 411.37□□□□□ -0.594e-16■□□□□ 8.2
NCBP2P52298 ACLY-203ENST00000393896 3682 ntAPPRIS ALT1 TSL 2 BASIC10.63□□□□□ -0.714e-16■□□□□ 8.2
NCBP2P52298 ACLY-210ENST00000592970 540 ntTSL 49.24□□□□□ -0.934e-16■□□□□ 8.2
NCBP2P52298 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -14e-16■□□□□ 8.2
NCBP2P52298 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.014e-16■□□□□ 8.2
NCBP2P52298 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.14e-16■□□□□ 8.2
NCBP2P52298 GNB1-202ENST00000434686 684 ntTSL 38.62□□□□□ -1.036e-10■□□□□ 8.2
NCBP2P52298 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.243e-17■□□□□ 8.2
NCBP2P52298 MAP3K2-202ENST00000409179 689 ntTSL 522.44■■□□□ 1.182e-7■□□□□ 8.2
NCBP2P52298 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.872e-7■□□□□ 8.2
NCBP2P52298 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.81■□□□□ 0.122e-7■□□□□ 8.2
NCBP2P52298 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.992e-7■□□□□ 8.2
NCBP2P52298 EGFL7-206ENST00000492002 654 ntTSL 520.95■□□□□ 0.941e-10■□□□□ 8.2
NCBP2P52298 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.541e-10■□□□□ 8.2
NCBP2P52298 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.238e-10■□□□□ 8.1
NCBP2P52298 SART3-203ENST00000546611 1184 ntBASIC16.1■□□□□ 0.178e-10■□□□□ 8.1
NCBP2P52298 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.86■□□□□ 0.138e-10■□□□□ 8.1
NCBP2P52298 TVP23C-CDRT4-204ENST00000557349 1005 ntTSL 215.47■□□□□ 0.078e-10■□□□□ 8.1
NCBP2P52298 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.068e-10■□□□□ 8.1
NCBP2P52298 SART3-208ENST00000547528 1935 ntTSL 1 (best)13.11□□□□□ -0.318e-10■□□□□ 8.1
NCBP2P52298 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.398e-10■□□□□ 8.1
NCBP2P52298 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.518e-10■□□□□ 8.1
NCBP2P52298 SART3-215ENST00000552221 544 ntTSL 411.67□□□□□ -0.548e-10■□□□□ 8.1
NCBP2P52298 SART3-206ENST00000546815 2318 ntTSL 511.45□□□□□ -0.588e-10■□□□□ 8.1
NCBP2P52298 SART3-202ENST00000431469 2834 ntTSL 1 (best) BASIC10.9□□□□□ -0.668e-10■□□□□ 8.1
NCBP2P52298 SART3-201ENST00000228284 4004 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.878e-10■□□□□ 8.1
NCBP2P52298 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.048e-10■□□□□ 8.1
NCBP2P52298 SART3-204ENST00000546728 3637 ntTSL 1 (best)8.1□□□□□ -1.118e-10■□□□□ 8.1
NCBP2P52298 DDB1-220ENST00000542337 558 ntTSL 318.46■□□□□ 0.554e-6■□□□□ 8.1
NCBP2P52298 CYBRD1-207ENST00000494587 549 ntTSL 416.17■□□□□ 0.184e-6■□□□□ 8.1
NCBP2P52298 CYBRD1-205ENST00000468308 763 ntTSL 314.82□□□□□ -0.044e-6■□□□□ 8.1
NCBP2P52298 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.064e-6■□□□□ 8.1
NCBP2P52298 CYBRD1-206ENST00000474182 465 ntTSL 513.75□□□□□ -0.214e-6■□□□□ 8.1
NCBP2P52298 SND1-210ENST00000483503 603 ntTSL 511.3□□□□□ -0.64e-6■□□□□ 8.1
NCBP2P52298 DDB1-223ENST00000543658 571 ntTSL 411.17□□□□□ -0.624e-6■□□□□ 8.1
NCBP2P52298 CYBRD1-202ENST00000375252 3540 ntTSL 1 (best) BASIC11.15□□□□□ -0.624e-6■□□□□ 8.1
NCBP2P52298 DDB1-222ENST00000543627 540 ntTSL 510.23□□□□□ -0.774e-6■□□□□ 8.1
NCBP2P52298 DDB1-221ENST00000543162 575 ntTSL 410.04□□□□□ -0.84e-6■□□□□ 8.1
NCBP2P52298 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.824e-6■□□□□ 8.1
NCBP2P52298 SND1-215ENST00000492772 549 ntTSL 49.81□□□□□ -0.844e-6■□□□□ 8.1
NCBP2P52298 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.854e-6■□□□□ 8.1
NCBP2P52298 SPAG5-206ENST00000578479 904 ntTSL 39.19□□□□□ -0.944e-6■□□□□ 8.1
NCBP2P52298 SPAG5-210ENST00000580567 899 ntTSL 39.19□□□□□ -0.944e-6■□□□□ 8.1
NCBP2P52298 DDB1-217ENST00000540166 3906 ntTSL 27.95□□□□□ -1.144e-6■□□□□ 8.1
NCBP2P52298 DDB1-208ENST00000537120 1215 ntTSL 27.65□□□□□ -1.184e-6■□□□□ 8.1
NCBP2P52298 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.7□□□□□ -1.54e-6■□□□□ 8.1
NCBP2P52298 EIF4A2-215ENST00000467585 570 ntTSL 211.96□□□□□ -0.491e-24■□□□□ 8.1
NCBP2P52298 EIF4A2-227ENST00000498746 579 ntTSL 29.59□□□□□ -0.871e-24■□□□□ 8.1
NCBP2P52298 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.9■■□□□ 1.583e-7■□□□□ 8.1
NCBP2P52298 NDUFS6-203ENST00000510329 260 ntTSL 319.46■□□□□ 0.713e-7■□□□□ 8.1
NCBP2P52298 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.79■□□□□ 0.63e-7■□□□□ 8.1
NCBP2P52298 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.1■□□□□ 0.493e-7■□□□□ 8.1
NCBP2P52298 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.75■□□□□ 0.433e-7■□□□□ 8.1
NCBP2P52298 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.413e-7■□□□□ 8.1
NCBP2P52298 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.43e-7■□□□□ 8.1
NCBP2P52298 AP5S1-204ENST00000455742 584 ntTSL 417.5■□□□□ 0.393e-7■□□□□ 8.1
NCBP2P52298 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.313e-7■□□□□ 8.1
NCBP2P52298 KIDINS220-211ENST00000496725 562 ntTSL 415.17■□□□□ 0.023e-7■□□□□ 8.1
NCBP2P52298 AP5S1-205ENST00000615891 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.533e-7■□□□□ 8.1
NCBP2P52298 AL109804.1-201ENST00000620777 562 ntTSL 5 BASIC8.12□□□□□ -1.113e-7■□□□□ 8.1
NCBP2P52298 KIDINS220-209ENST00000489024 4084 ntTSL 58.04□□□□□ -1.123e-7■□□□□ 8.1
NCBP2P52298 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.5□□□□□ -1.213e-7■□□□□ 8.1
NCBP2P52298 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.5□□□□□ -1.213e-7■□□□□ 8.1
NCBP2P52298 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.263e-7■□□□□ 8.1
NCBP2P52298 KIDINS220-212ENST00000569008 8735 ntTSL 55.86□□□□□ -1.473e-7■□□□□ 8.1
NCBP2P52298 KIDINS220-208ENST00000488729 5988 ntTSL 1 (best)5.54□□□□□ -1.523e-7■□□□□ 8.1
NCBP2P52298 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.593e-7■□□□□ 8.1
NCBP2P52298 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.081e-7■□□□□ 8.1
NCBP2P52298 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.71e-8■□□□□ 8.1
NCBP2P52298 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.06■□□□□ 0.321e-8■□□□□ 8.1
NCBP2P52298 SDC2-205ENST00000520233 563 ntTSL 416.65■□□□□ 0.261e-8■□□□□ 8.1
NCBP2P52298 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.071e-8■□□□□ 8.1
NCBP2P52298 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.261e-8■□□□□ 8.1
Retrieved 100 of 18,329 protein–RNA pairs in 245.1 ms