Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC40.38■■■■■ 4.05
BIVM-ERCC5R4GMW8 AL512631.2-201ENST00000604634 923 ntBASIC40.37■■■■■ 4.05
BIVM-ERCC5R4GMW8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC40.37■■■■■ 4.05
BIVM-ERCC5R4GMW8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC40.36■■■■■ 4.05
BIVM-ERCC5R4GMW8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC40.36■■■■■ 4.05
BIVM-ERCC5R4GMW8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC40.36■■■■■ 4.05
BIVM-ERCC5R4GMW8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC40.36■■■■■ 4.05
BIVM-ERCC5R4GMW8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC40.36■■■■■ 4.05
BIVM-ERCC5R4GMW8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC40.35■■■■■ 4.05
BIVM-ERCC5R4GMW8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
BIVM-ERCC5R4GMW8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC40.35■■■■■ 4.05
BIVM-ERCC5R4GMW8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
BIVM-ERCC5R4GMW8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC40.34■■■■■ 4.05
BIVM-ERCC5R4GMW8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC40.34■■■■■ 4.05
BIVM-ERCC5R4GMW8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC40.34■■■■■ 4.05
BIVM-ERCC5R4GMW8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC40.34■■■■■ 4.05
BIVM-ERCC5R4GMW8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC40.34■■■■■ 4.05
BIVM-ERCC5R4GMW8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC40.34■■■■■ 4.05
BIVM-ERCC5R4GMW8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC40.32■■■■■ 4.05
BIVM-ERCC5R4GMW8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC40.32■■■■■ 4.05
BIVM-ERCC5R4GMW8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC40.32■■■■■ 4.05
BIVM-ERCC5R4GMW8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC40.32■■■■■ 4.05
BIVM-ERCC5R4GMW8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC40.32■■■■■ 4.05
BIVM-ERCC5R4GMW8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC40.32■■■■■ 4.05
BIVM-ERCC5R4GMW8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC40.32■■■■■ 4.05
BIVM-ERCC5R4GMW8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC40.32■■■■■ 4.05
BIVM-ERCC5R4GMW8 MIR6724-1-201ENST00000616420 92 ntBASIC40.32■■■■■ 4.05
BIVM-ERCC5R4GMW8 MIR6724-2-201ENST00000616483 92 ntBASIC40.32■■■■■ 4.05
BIVM-ERCC5R4GMW8 MIR6724-4-201ENST00000617390 92 ntBASIC40.32■■■■■ 4.05
BIVM-ERCC5R4GMW8 MIR6724-3-201ENST00000622482 92 ntBASIC40.32■■■■■ 4.05
BIVM-ERCC5R4GMW8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC40.32■■■■■ 4.05
BIVM-ERCC5R4GMW8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.04
BIVM-ERCC5R4GMW8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC40.31■■■■■ 4.04
BIVM-ERCC5R4GMW8 SRR-208ENST00000576848 588 ntTSL 4 BASIC40.31■■■■■ 4.04
BIVM-ERCC5R4GMW8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC40.3■■■■■ 4.04
BIVM-ERCC5R4GMW8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC40.3■■■■■ 4.04
BIVM-ERCC5R4GMW8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC40.3■■■■■ 4.04
BIVM-ERCC5R4GMW8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC40.3■■■■■ 4.04
BIVM-ERCC5R4GMW8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC40.3■■■■■ 4.04
BIVM-ERCC5R4GMW8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC40.29■■■■■ 4.04
BIVM-ERCC5R4GMW8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC40.29■■■■■ 4.04
BIVM-ERCC5R4GMW8 MTDHP2-201ENST00000601468 714 ntBASIC40.29■■■■■ 4.04
BIVM-ERCC5R4GMW8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC40.28■■■■■ 4.04
BIVM-ERCC5R4GMW8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC40.28■■■■■ 4.04
BIVM-ERCC5R4GMW8 MIR3621-201ENST00000580529 85 ntBASIC40.28■■■■■ 4.04
BIVM-ERCC5R4GMW8 AC110285.6-201ENST00000617652 491 ntBASIC40.28■■■■■ 4.04
BIVM-ERCC5R4GMW8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
BIVM-ERCC5R4GMW8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
BIVM-ERCC5R4GMW8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
BIVM-ERCC5R4GMW8 AF131216.4-201ENST00000638924 1588 ntBASIC40.28■■■■■ 4.04
BIVM-ERCC5R4GMW8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC40.27■■■■■ 4.04
BIVM-ERCC5R4GMW8 GAK-223ENST00000628912 497 ntTSL 5 BASIC40.27■■■■■ 4.04
BIVM-ERCC5R4GMW8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC40.27■■■■■ 4.04
BIVM-ERCC5R4GMW8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
BIVM-ERCC5R4GMW8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC40.27■■■■■ 4.04
BIVM-ERCC5R4GMW8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC40.26■■■■■ 4.04
BIVM-ERCC5R4GMW8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC40.26■■■■■ 4.04
BIVM-ERCC5R4GMW8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC40.26■■■■■ 4.04
BIVM-ERCC5R4GMW8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC40.26■■■■■ 4.04
BIVM-ERCC5R4GMW8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC40.26■■■■■ 4.04
BIVM-ERCC5R4GMW8 MIR4466-201ENST00000606121 54 ntBASIC40.26■■■■■ 4.04
BIVM-ERCC5R4GMW8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC40.26■■■■■ 4.04
BIVM-ERCC5R4GMW8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC40.26■■■■■ 4.03
BIVM-ERCC5R4GMW8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC40.25■■■■■ 4.03
BIVM-ERCC5R4GMW8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC40.25■■■■■ 4.03
BIVM-ERCC5R4GMW8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC40.24■■■■■ 4.03
BIVM-ERCC5R4GMW8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC40.24■■■■■ 4.03
BIVM-ERCC5R4GMW8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC40.24■■■■■ 4.03
BIVM-ERCC5R4GMW8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC40.24■■■■■ 4.03
BIVM-ERCC5R4GMW8 AC010997.5-201ENST00000609182 354 ntBASIC40.24■■■■■ 4.03
BIVM-ERCC5R4GMW8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC40.23■■■■■ 4.03
BIVM-ERCC5R4GMW8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
BIVM-ERCC5R4GMW8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC40.23■■■■■ 4.03
BIVM-ERCC5R4GMW8 MIR935-201ENST00000401179 91 ntBASIC40.23■■■■■ 4.03
BIVM-ERCC5R4GMW8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC40.22■■■■■ 4.03
BIVM-ERCC5R4GMW8 AL136116.3-201ENST00000402907 1138 ntBASIC40.22■■■■■ 4.03
BIVM-ERCC5R4GMW8 AL139246.5-201ENST00000606645 996 ntBASIC40.22■■■■■ 4.03
BIVM-ERCC5R4GMW8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC40.22■■■■■ 4.03
BIVM-ERCC5R4GMW8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC40.22■■■■■ 4.03
BIVM-ERCC5R4GMW8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC40.21■■■■■ 4.03
BIVM-ERCC5R4GMW8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC40.21■■■■■ 4.03
BIVM-ERCC5R4GMW8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC40.21■■■■■ 4.03
BIVM-ERCC5R4GMW8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC40.21■■■■■ 4.03
BIVM-ERCC5R4GMW8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC40.2■■■■■ 4.03
BIVM-ERCC5R4GMW8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC40.2■■■■■ 4.03
BIVM-ERCC5R4GMW8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC40.2■■■■■ 4.03
BIVM-ERCC5R4GMW8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC40.19■■■■■ 4.02
BIVM-ERCC5R4GMW8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC40.19■■■■■ 4.02
BIVM-ERCC5R4GMW8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC40.18■■■■■ 4.02
BIVM-ERCC5R4GMW8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC40.18■■■■■ 4.02
BIVM-ERCC5R4GMW8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC40.18■■■■■ 4.02
BIVM-ERCC5R4GMW8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC40.18■■■■■ 4.02
BIVM-ERCC5R4GMW8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC40.17■■■■■ 4.02
BIVM-ERCC5R4GMW8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC40.17■■■■■ 4.02
BIVM-ERCC5R4GMW8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC40.17■■■■■ 4.02
BIVM-ERCC5R4GMW8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
BIVM-ERCC5R4GMW8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
BIVM-ERCC5R4GMW8 RASSF1-AS1-201ENST00000629828 790 ntBASIC40.16■■■■■ 4.02
BIVM-ERCC5R4GMW8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
BIVM-ERCC5R4GMW8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms