Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
PCDHB13Q9Y5F0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHB13Q9Y5F0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHB13Q9Y5F0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHB13Q9Y5F0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.18■■□□□ 1.78
PCDHB13Q9Y5F0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.18■■□□□ 1.78
PCDHB13Q9Y5F0 AC004987.1-201ENST00000428627 508 ntBASIC26.18■■□□□ 1.78
PCDHB13Q9Y5F0 ATP5G2P3-201ENST00000429083 425 ntBASIC26.18■■□□□ 1.78
PCDHB13Q9Y5F0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB13Q9Y5F0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB13Q9Y5F0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB13Q9Y5F0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.17■■□□□ 1.78
PCDHB13Q9Y5F0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB13Q9Y5F0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDHB13Q9Y5F0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB13Q9Y5F0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
PCDHB13Q9Y5F0 DUX4L18-201ENST00000553347 1267 ntBASIC26.17■■□□□ 1.78
PCDHB13Q9Y5F0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB13Q9Y5F0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHB13Q9Y5F0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHB13Q9Y5F0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.16■■□□□ 1.78
PCDHB13Q9Y5F0 AC012354.3-201ENST00000623734 483 ntBASIC26.16■■□□□ 1.78
PCDHB13Q9Y5F0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHB13Q9Y5F0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDHB13Q9Y5F0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.15■■□□□ 1.78
PCDHB13Q9Y5F0 TSPY13P-201ENST00000338964 914 ntBASIC26.15■■□□□ 1.78
PCDHB13Q9Y5F0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.15■■□□□ 1.78
PCDHB13Q9Y5F0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHB13Q9Y5F0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHB13Q9Y5F0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
PCDHB13Q9Y5F0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
PCDHB13Q9Y5F0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
PCDHB13Q9Y5F0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDHB13Q9Y5F0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHB13Q9Y5F0 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.14■■□□□ 1.78
PCDHB13Q9Y5F0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
PCDHB13Q9Y5F0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHB13Q9Y5F0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHB13Q9Y5F0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
PCDHB13Q9Y5F0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB13Q9Y5F0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDHB13Q9Y5F0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB13Q9Y5F0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB13Q9Y5F0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHB13Q9Y5F0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB13Q9Y5F0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB13Q9Y5F0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHB13Q9Y5F0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB13Q9Y5F0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB13Q9Y5F0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
PCDHB13Q9Y5F0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
PCDHB13Q9Y5F0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB13Q9Y5F0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB13Q9Y5F0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.11■■□□□ 1.77
PCDHB13Q9Y5F0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB13Q9Y5F0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.11■■□□□ 1.77
PCDHB13Q9Y5F0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB13Q9Y5F0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB13Q9Y5F0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB13Q9Y5F0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
PCDHB13Q9Y5F0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB13Q9Y5F0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
PCDHB13Q9Y5F0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB13Q9Y5F0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB13Q9Y5F0 SLC6A10P-202ENST00000431994 2058 ntBASIC26.1■■□□□ 1.77
PCDHB13Q9Y5F0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB13Q9Y5F0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB13Q9Y5F0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB13Q9Y5F0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDHB13Q9Y5F0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDHB13Q9Y5F0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.09■■□□□ 1.77
PCDHB13Q9Y5F0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB13Q9Y5F0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB13Q9Y5F0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB13Q9Y5F0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.09■■□□□ 1.77
PCDHB13Q9Y5F0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
PCDHB13Q9Y5F0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHB13Q9Y5F0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
PCDHB13Q9Y5F0 AC139795.1-202ENST00000500444 432 ntBASIC26.08■■□□□ 1.77
PCDHB13Q9Y5F0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.08■■□□□ 1.77
PCDHB13Q9Y5F0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHB13Q9Y5F0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHB13Q9Y5F0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHB13Q9Y5F0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHB13Q9Y5F0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHB13Q9Y5F0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHB13Q9Y5F0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHB13Q9Y5F0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDHB13Q9Y5F0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB13Q9Y5F0 LONRF2P2-201ENST00000439212 571 ntBASIC26.06■■□□□ 1.76
PCDHB13Q9Y5F0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDHB13Q9Y5F0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.06■■□□□ 1.76
PCDHB13Q9Y5F0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHB13Q9Y5F0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
PCDHB13Q9Y5F0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHB13Q9Y5F0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHB13Q9Y5F0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHB13Q9Y5F0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHB13Q9Y5F0 AL033527.3-201ENST00000566366 1196 ntBASIC26.05■■□□□ 1.76
PCDHB13Q9Y5F0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms