Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 AC141586.4-201ENST00000624558 1573 ntBASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RCL1Q9Y2P8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RCL1Q9Y2P8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.31■□□□□ 0.68
RCL1Q9Y2P8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RCL1Q9Y2P8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.3■□□□□ 0.68
RCL1Q9Y2P8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RCL1Q9Y2P8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RCL1Q9Y2P8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RCL1Q9Y2P8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RCL1Q9Y2P8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RCL1Q9Y2P8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.29■□□□□ 0.68
RCL1Q9Y2P8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCL1Q9Y2P8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RCL1Q9Y2P8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.29■□□□□ 0.68
RCL1Q9Y2P8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RCL1Q9Y2P8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RCL1Q9Y2P8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.28■□□□□ 0.68
RCL1Q9Y2P8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RCL1Q9Y2P8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.28■□□□□ 0.68
RCL1Q9Y2P8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RCL1Q9Y2P8 MIR3665-201ENST00000578708 105 ntBASIC19.28■□□□□ 0.68
RCL1Q9Y2P8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RCL1Q9Y2P8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.28■□□□□ 0.68
RCL1Q9Y2P8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RCL1Q9Y2P8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
RCL1Q9Y2P8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RCL1Q9Y2P8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCL1Q9Y2P8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCL1Q9Y2P8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCL1Q9Y2P8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCL1Q9Y2P8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RCL1Q9Y2P8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RCL1Q9Y2P8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RCL1Q9Y2P8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RCL1Q9Y2P8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
RCL1Q9Y2P8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RCL1Q9Y2P8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCL1Q9Y2P8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.26■□□□□ 0.67
RCL1Q9Y2P8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RCL1Q9Y2P8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.26■□□□□ 0.67
RCL1Q9Y2P8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RCL1Q9Y2P8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RCL1Q9Y2P8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.26■□□□□ 0.67
RCL1Q9Y2P8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RCL1Q9Y2P8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RCL1Q9Y2P8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCL1Q9Y2P8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCL1Q9Y2P8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCL1Q9Y2P8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCL1Q9Y2P8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.24■□□□□ 0.67
RCL1Q9Y2P8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCL1Q9Y2P8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCL1Q9Y2P8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
RCL1Q9Y2P8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCL1Q9Y2P8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCL1Q9Y2P8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCL1Q9Y2P8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.23■□□□□ 0.67
RCL1Q9Y2P8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.23■□□□□ 0.67
RCL1Q9Y2P8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCL1Q9Y2P8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCL1Q9Y2P8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
RCL1Q9Y2P8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RCL1Q9Y2P8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RCL1Q9Y2P8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.22■□□□□ 0.67
RCL1Q9Y2P8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
RCL1Q9Y2P8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCL1Q9Y2P8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RCL1Q9Y2P8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCL1Q9Y2P8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCL1Q9Y2P8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCL1Q9Y2P8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCL1Q9Y2P8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RCL1Q9Y2P8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RCL1Q9Y2P8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCL1Q9Y2P8 AC004812.2-201ENST00000611079 2094 ntBASIC19.2■□□□□ 0.66
RCL1Q9Y2P8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCL1Q9Y2P8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCL1Q9Y2P8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCL1Q9Y2P8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCL1Q9Y2P8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCL1Q9Y2P8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCL1Q9Y2P8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCL1Q9Y2P8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCL1Q9Y2P8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RCL1Q9Y2P8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCL1Q9Y2P8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCL1Q9Y2P8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RCL1Q9Y2P8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.19■□□□□ 0.66
RCL1Q9Y2P8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.19■□□□□ 0.66
RCL1Q9Y2P8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.19■□□□□ 0.66
RCL1Q9Y2P8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RCL1Q9Y2P8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.19■□□□□ 0.66
RCL1Q9Y2P8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
RCL1Q9Y2P8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RCL1Q9Y2P8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCL1Q9Y2P8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCL1Q9Y2P8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms