Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TREM2Q9NZC2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TREM2Q9NZC2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TREM2Q9NZC2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TREM2Q9NZC2 AC020928.2-201ENST00000588717 2197 ntBASIC20.38■□□□□ 0.85
TREM2Q9NZC2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TREM2Q9NZC2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TREM2Q9NZC2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.38■□□□□ 0.85
TREM2Q9NZC2 AC139795.1-202ENST00000500444 432 ntBASIC20.37■□□□□ 0.85
TREM2Q9NZC2 AC010980.1-201ENST00000587192 1142 ntBASIC20.37■□□□□ 0.85
TREM2Q9NZC2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.37■□□□□ 0.85
TREM2Q9NZC2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TREM2Q9NZC2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TREM2Q9NZC2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.36■□□□□ 0.85
TREM2Q9NZC2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
TREM2Q9NZC2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TREM2Q9NZC2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TREM2Q9NZC2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TREM2Q9NZC2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TREM2Q9NZC2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.36■□□□□ 0.85
TREM2Q9NZC2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TREM2Q9NZC2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TREM2Q9NZC2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TREM2Q9NZC2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TREM2Q9NZC2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TREM2Q9NZC2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
TREM2Q9NZC2 ERN1-208ENST00000606895 2068 ntBASIC20.35■□□□□ 0.85
TREM2Q9NZC2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TREM2Q9NZC2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.35■□□□□ 0.85
TREM2Q9NZC2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TREM2Q9NZC2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TREM2Q9NZC2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREM2Q9NZC2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREM2Q9NZC2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREM2Q9NZC2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TREM2Q9NZC2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.34■□□□□ 0.85
TREM2Q9NZC2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TREM2Q9NZC2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.34■□□□□ 0.85
TREM2Q9NZC2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TREM2Q9NZC2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TREM2Q9NZC2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
TREM2Q9NZC2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.33■□□□□ 0.85
TREM2Q9NZC2 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.33■□□□□ 0.85
TREM2Q9NZC2 KRT8P33-201ENST00000508125 1423 ntBASIC20.33■□□□□ 0.84
TREM2Q9NZC2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TREM2Q9NZC2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TREM2Q9NZC2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.32■□□□□ 0.84
TREM2Q9NZC2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TREM2Q9NZC2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.32■□□□□ 0.84
TREM2Q9NZC2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
TREM2Q9NZC2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.32■□□□□ 0.84
TREM2Q9NZC2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TREM2Q9NZC2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TREM2Q9NZC2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.32■□□□□ 0.84
TREM2Q9NZC2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TREM2Q9NZC2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.31■□□□□ 0.84
TREM2Q9NZC2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TREM2Q9NZC2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TREM2Q9NZC2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.3■□□□□ 0.84
TREM2Q9NZC2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.3■□□□□ 0.84
TREM2Q9NZC2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.3■□□□□ 0.84
TREM2Q9NZC2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TREM2Q9NZC2 AC074183.2-201ENST00000623112 922 ntBASIC20.3■□□□□ 0.84
TREM2Q9NZC2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TREM2Q9NZC2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.3■□□□□ 0.84
TREM2Q9NZC2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TREM2Q9NZC2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TREM2Q9NZC2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.29■□□□□ 0.84
TREM2Q9NZC2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.29■□□□□ 0.84
TREM2Q9NZC2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.29■□□□□ 0.84
TREM2Q9NZC2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TREM2Q9NZC2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TREM2Q9NZC2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TREM2Q9NZC2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TREM2Q9NZC2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TREM2Q9NZC2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TREM2Q9NZC2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TREM2Q9NZC2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TREM2Q9NZC2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.28■□□□□ 0.84
TREM2Q9NZC2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.28■□□□□ 0.84
TREM2Q9NZC2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TREM2Q9NZC2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TREM2Q9NZC2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TREM2Q9NZC2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TREM2Q9NZC2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.28■□□□□ 0.84
TREM2Q9NZC2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TREM2Q9NZC2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TREM2Q9NZC2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TREM2Q9NZC2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TREM2Q9NZC2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TREM2Q9NZC2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.27■□□□□ 0.84
TREM2Q9NZC2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TREM2Q9NZC2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TREM2Q9NZC2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TREM2Q9NZC2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.27■□□□□ 0.83
TREM2Q9NZC2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TREM2Q9NZC2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.26■□□□□ 0.83
TREM2Q9NZC2 PVT1_1.1-201ENST00000615125 194 ntBASIC20.26■□□□□ 0.83
TREM2Q9NZC2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.26■□□□□ 0.83
TREM2Q9NZC2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms