Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFT46Q9NQC8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
IFT46Q9NQC8 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.27■□□□□ 0.84
IFT46Q9NQC8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
IFT46Q9NQC8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT46Q9NQC8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.27■□□□□ 0.84
IFT46Q9NQC8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT46Q9NQC8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT46Q9NQC8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT46Q9NQC8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.27■□□□□ 0.84
IFT46Q9NQC8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IFT46Q9NQC8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
IFT46Q9NQC8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.27■□□□□ 0.83
IFT46Q9NQC8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT46Q9NQC8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
IFT46Q9NQC8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IFT46Q9NQC8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IFT46Q9NQC8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.26■□□□□ 0.83
IFT46Q9NQC8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT46Q9NQC8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.26■□□□□ 0.83
IFT46Q9NQC8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT46Q9NQC8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT46Q9NQC8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT46Q9NQC8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT46Q9NQC8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT46Q9NQC8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT46Q9NQC8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT46Q9NQC8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT46Q9NQC8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IFT46Q9NQC8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT46Q9NQC8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
IFT46Q9NQC8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT46Q9NQC8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.24■□□□□ 0.83
IFT46Q9NQC8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT46Q9NQC8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT46Q9NQC8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFT46Q9NQC8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
IFT46Q9NQC8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFT46Q9NQC8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
IFT46Q9NQC8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFT46Q9NQC8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFT46Q9NQC8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFT46Q9NQC8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IFT46Q9NQC8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT46Q9NQC8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
IFT46Q9NQC8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
IFT46Q9NQC8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT46Q9NQC8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT46Q9NQC8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT46Q9NQC8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
IFT46Q9NQC8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IFT46Q9NQC8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.22■□□□□ 0.83
IFT46Q9NQC8 AC021231.2-201ENST00000594613 730 ntBASIC20.22■□□□□ 0.83
IFT46Q9NQC8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT46Q9NQC8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT46Q9NQC8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT46Q9NQC8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT46Q9NQC8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.21■□□□□ 0.83
IFT46Q9NQC8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT46Q9NQC8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
IFT46Q9NQC8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT46Q9NQC8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT46Q9NQC8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT46Q9NQC8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT46Q9NQC8 DUX4L29-201ENST00000425409 679 ntBASIC20.2■□□□□ 0.82
IFT46Q9NQC8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
IFT46Q9NQC8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
IFT46Q9NQC8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT46Q9NQC8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT46Q9NQC8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.19■□□□□ 0.82
IFT46Q9NQC8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT46Q9NQC8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT46Q9NQC8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT46Q9NQC8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT46Q9NQC8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT46Q9NQC8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT46Q9NQC8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT46Q9NQC8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT46Q9NQC8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
IFT46Q9NQC8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT46Q9NQC8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT46Q9NQC8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT46Q9NQC8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT46Q9NQC8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
IFT46Q9NQC8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
IFT46Q9NQC8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IFT46Q9NQC8 AC097639.1-201ENST00000565519 1891 ntBASIC20.18■□□□□ 0.82
IFT46Q9NQC8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.17■□□□□ 0.82
IFT46Q9NQC8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
IFT46Q9NQC8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT46Q9NQC8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT46Q9NQC8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT46Q9NQC8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT46Q9NQC8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT46Q9NQC8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IFT46Q9NQC8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IFT46Q9NQC8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
IFT46Q9NQC8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT46Q9NQC8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT46Q9NQC8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms