Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.72■■□□□ 1.23
CHD8Q9HCK8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.72■■□□□ 1.23
CHD8Q9HCK8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHD8Q9HCK8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHD8Q9HCK8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
CHD8Q9HCK8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD8Q9HCK8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHD8Q9HCK8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.71■■□□□ 1.23
CHD8Q9HCK8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD8Q9HCK8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD8Q9HCK8 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.71■■□□□ 1.23
CHD8Q9HCK8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.71■■□□□ 1.23
CHD8Q9HCK8 SLC47A1P1-202ENST00000449666 945 ntBASIC22.71■■□□□ 1.23
CHD8Q9HCK8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CHD8Q9HCK8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CHD8Q9HCK8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD8Q9HCK8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CHD8Q9HCK8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHD8Q9HCK8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CHD8Q9HCK8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD8Q9HCK8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD8Q9HCK8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD8Q9HCK8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.68■■□□□ 1.22
CHD8Q9HCK8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.68■■□□□ 1.22
CHD8Q9HCK8 AC066615.1-201ENST00000640911 628 ntBASIC22.68■■□□□ 1.22
CHD8Q9HCK8 AP004833.2-201ENST00000532228 1454 ntBASIC22.68■■□□□ 1.22
CHD8Q9HCK8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD8Q9HCK8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CHD8Q9HCK8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD8Q9HCK8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD8Q9HCK8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.67■■□□□ 1.22
CHD8Q9HCK8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
CHD8Q9HCK8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD8Q9HCK8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.67■■□□□ 1.22
CHD8Q9HCK8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD8Q9HCK8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CHD8Q9HCK8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD8Q9HCK8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD8Q9HCK8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.66■■□□□ 1.22
CHD8Q9HCK8 CA15P2-201ENST00000611168 834 ntBASIC22.66■■□□□ 1.22
CHD8Q9HCK8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD8Q9HCK8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.66■■□□□ 1.22
CHD8Q9HCK8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.65■■□□□ 1.22
CHD8Q9HCK8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.65■■□□□ 1.22
CHD8Q9HCK8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD8Q9HCK8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD8Q9HCK8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD8Q9HCK8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.65■■□□□ 1.22
CHD8Q9HCK8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHD8Q9HCK8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CHD8Q9HCK8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.64■■□□□ 1.22
CHD8Q9HCK8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CHD8Q9HCK8 IRS3P-201ENST00000223076 1006 ntBASIC22.64■■□□□ 1.21
CHD8Q9HCK8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.64■■□□□ 1.21
CHD8Q9HCK8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD8Q9HCK8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
CHD8Q9HCK8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.63■■□□□ 1.21
CHD8Q9HCK8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD8Q9HCK8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD8Q9HCK8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD8Q9HCK8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.63■■□□□ 1.21
CHD8Q9HCK8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.63■■□□□ 1.21
CHD8Q9HCK8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CHD8Q9HCK8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.63■■□□□ 1.21
CHD8Q9HCK8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.63■■□□□ 1.21
CHD8Q9HCK8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.63■■□□□ 1.21
CHD8Q9HCK8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD8Q9HCK8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD8Q9HCK8 AL137784.2-201ENST00000607332 1000 ntBASIC22.62■■□□□ 1.21
CHD8Q9HCK8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.61■■□□□ 1.21
CHD8Q9HCK8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD8Q9HCK8 AC011551.1-201ENST00000614101 683 ntBASIC22.6■■□□□ 1.21
CHD8Q9HCK8 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.6■■□□□ 1.21
CHD8Q9HCK8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CHD8Q9HCK8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD8Q9HCK8 KRT18P10-201ENST00000388836 1287 ntBASIC22.59■■□□□ 1.21
CHD8Q9HCK8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD8Q9HCK8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.59■■□□□ 1.21
CHD8Q9HCK8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.59■■□□□ 1.21
CHD8Q9HCK8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.59■■□□□ 1.21
CHD8Q9HCK8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.59■■□□□ 1.21
CHD8Q9HCK8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CHD8Q9HCK8 HLA-L-209ENST00000420110 1011 ntBASIC22.58■■□□□ 1.21
CHD8Q9HCK8 SRD5A1P1-201ENST00000442297 786 ntBASIC22.58■■□□□ 1.21
CHD8Q9HCK8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.58■■□□□ 1.21
CHD8Q9HCK8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.58■■□□□ 1.21
CHD8Q9HCK8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.58■■□□□ 1.21
CHD8Q9HCK8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CHD8Q9HCK8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD8Q9HCK8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.57■■□□□ 1.2
CHD8Q9HCK8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CHD8Q9HCK8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD8Q9HCK8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.57■■□□□ 1.2
CHD8Q9HCK8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.56■■□□□ 1.2
CHD8Q9HCK8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.56■■□□□ 1.2
CHD8Q9HCK8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHD8Q9HCK8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.56■■□□□ 1.2
CHD8Q9HCK8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHD8Q9HCK8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.55■■□□□ 1.2
CHD8Q9HCK8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms