Protein–RNA interactions for Protein: Q9D1L0

Chchd2, Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mousemouse

Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd2Q9D1L0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chchd2Q9D1L0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.54■□□□□ 0.88
Chchd2Q9D1L0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.54■□□□□ 0.88
Chchd2Q9D1L0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chchd2Q9D1L0 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.53■□□□□ 0.88
Chchd2Q9D1L0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.52■□□□□ 0.88
Chchd2Q9D1L0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.52■□□□□ 0.88
Chchd2Q9D1L0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chchd2Q9D1L0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chchd2Q9D1L0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chchd2Q9D1L0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chchd2Q9D1L0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chchd2Q9D1L0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chchd2Q9D1L0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chchd2Q9D1L0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chchd2Q9D1L0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chchd2Q9D1L0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.5■□□□□ 0.87
Chchd2Q9D1L0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Chchd2Q9D1L0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.5■□□□□ 0.87
Chchd2Q9D1L0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chchd2Q9D1L0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chchd2Q9D1L0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chchd2Q9D1L0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chchd2Q9D1L0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.49■□□□□ 0.87
Chchd2Q9D1L0 Etf1-202ENSMUST00000180351 108 ntBASIC20.49■□□□□ 0.87
Chchd2Q9D1L0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.49■□□□□ 0.87
Chchd2Q9D1L0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chchd2Q9D1L0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chchd2Q9D1L0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chchd2Q9D1L0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chchd2Q9D1L0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chchd2Q9D1L0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chchd2Q9D1L0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chchd2Q9D1L0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chchd2Q9D1L0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chchd2Q9D1L0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chchd2Q9D1L0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.47■□□□□ 0.87
Chchd2Q9D1L0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chchd2Q9D1L0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.47■□□□□ 0.87
Chchd2Q9D1L0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chchd2Q9D1L0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chchd2Q9D1L0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chchd2Q9D1L0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chchd2Q9D1L0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chchd2Q9D1L0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chchd2Q9D1L0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.45■□□□□ 0.86
Chchd2Q9D1L0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chchd2Q9D1L0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.45■□□□□ 0.86
Chchd2Q9D1L0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chchd2Q9D1L0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chchd2Q9D1L0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Chchd2Q9D1L0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chchd2Q9D1L0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chchd2Q9D1L0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chchd2Q9D1L0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chchd2Q9D1L0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chchd2Q9D1L0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Chchd2Q9D1L0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.44■□□□□ 0.86
Chchd2Q9D1L0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.44■□□□□ 0.86
Chchd2Q9D1L0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.44■□□□□ 0.86
Chchd2Q9D1L0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chchd2Q9D1L0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.44■□□□□ 0.86
Chchd2Q9D1L0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chchd2Q9D1L0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Chchd2Q9D1L0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Chchd2Q9D1L0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chchd2Q9D1L0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Chchd2Q9D1L0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chchd2Q9D1L0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Chchd2Q9D1L0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chchd2Q9D1L0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chchd2Q9D1L0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chchd2Q9D1L0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Chchd2Q9D1L0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Chchd2Q9D1L0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chchd2Q9D1L0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chchd2Q9D1L0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.42■□□□□ 0.86
Chchd2Q9D1L0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chchd2Q9D1L0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chchd2Q9D1L0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chchd2Q9D1L0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Chchd2Q9D1L0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chchd2Q9D1L0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.41■□□□□ 0.86
Chchd2Q9D1L0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chchd2Q9D1L0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chchd2Q9D1L0 Gm10399-202ENSMUST00000202768 748 ntBASIC20.41■□□□□ 0.86
Chchd2Q9D1L0 Gm40881-201ENSMUST00000223397 166 ntBASIC20.41■□□□□ 0.86
Chchd2Q9D1L0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chchd2Q9D1L0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Chchd2Q9D1L0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.4■□□□□ 0.86
Chchd2Q9D1L0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Chchd2Q9D1L0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Chchd2Q9D1L0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.39■□□□□ 0.85
Chchd2Q9D1L0 Gm7417-201ENSMUST00000192950 473 ntBASIC20.39■□□□□ 0.85
Chchd2Q9D1L0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Chchd2Q9D1L0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chchd2Q9D1L0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.38■□□□□ 0.85
Chchd2Q9D1L0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chchd2Q9D1L0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chchd2Q9D1L0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms