Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf138Q9CQE0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf138Q9CQE0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf138Q9CQE0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.4■□□□□ 0.86
Rnf138Q9CQE0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.4■□□□□ 0.86
Rnf138Q9CQE0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.4■□□□□ 0.86
Rnf138Q9CQE0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf138Q9CQE0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rnf138Q9CQE0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf138Q9CQE0 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.39■□□□□ 0.86
Rnf138Q9CQE0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf138Q9CQE0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf138Q9CQE0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf138Q9CQE0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf138Q9CQE0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf138Q9CQE0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf138Q9CQE0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf138Q9CQE0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.38■□□□□ 0.85
Rnf138Q9CQE0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf138Q9CQE0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf138Q9CQE0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf138Q9CQE0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf138Q9CQE0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf138Q9CQE0 Gm14117-201ENSMUST00000122417 843 ntBASIC20.37■□□□□ 0.85
Rnf138Q9CQE0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.37■□□□□ 0.85
Rnf138Q9CQE0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf138Q9CQE0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf138Q9CQE0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf138Q9CQE0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf138Q9CQE0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf138Q9CQE0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.36■□□□□ 0.85
Rnf138Q9CQE0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf138Q9CQE0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.36■□□□□ 0.85
Rnf138Q9CQE0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf138Q9CQE0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Rnf138Q9CQE0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rnf138Q9CQE0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rnf138Q9CQE0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf138Q9CQE0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf138Q9CQE0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.34■□□□□ 0.85
Rnf138Q9CQE0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf138Q9CQE0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Rnf138Q9CQE0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf138Q9CQE0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Rnf138Q9CQE0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.33■□□□□ 0.85
Rnf138Q9CQE0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf138Q9CQE0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf138Q9CQE0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Rnf138Q9CQE0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Rnf138Q9CQE0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf138Q9CQE0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf138Q9CQE0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.32■□□□□ 0.84
Rnf138Q9CQE0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.32■□□□□ 0.84
Rnf138Q9CQE0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rnf138Q9CQE0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf138Q9CQE0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf138Q9CQE0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf138Q9CQE0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf138Q9CQE0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf138Q9CQE0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf138Q9CQE0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf138Q9CQE0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf138Q9CQE0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.31■□□□□ 0.84
Rnf138Q9CQE0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf138Q9CQE0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rnf138Q9CQE0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rnf138Q9CQE0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.3■□□□□ 0.84
Rnf138Q9CQE0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.3■□□□□ 0.84
Rnf138Q9CQE0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf138Q9CQE0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Rnf138Q9CQE0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf138Q9CQE0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf138Q9CQE0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf138Q9CQE0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf138Q9CQE0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf138Q9CQE0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf138Q9CQE0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rnf138Q9CQE0 Gm10399-202ENSMUST00000202768 748 ntBASIC20.29■□□□□ 0.84
Rnf138Q9CQE0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.29■□□□□ 0.84
Rnf138Q9CQE0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.29■□□□□ 0.84
Rnf138Q9CQE0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf138Q9CQE0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rnf138Q9CQE0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf138Q9CQE0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rnf138Q9CQE0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf138Q9CQE0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf138Q9CQE0 Etf1-202ENSMUST00000180351 108 ntBASIC20.28■□□□□ 0.84
Rnf138Q9CQE0 Gm40881-201ENSMUST00000223397 166 ntBASIC20.28■□□□□ 0.84
Rnf138Q9CQE0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf138Q9CQE0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf138Q9CQE0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.27■□□□□ 0.84
Rnf138Q9CQE0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.27■□□□□ 0.84
Rnf138Q9CQE0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Rnf138Q9CQE0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.26■□□□□ 0.83
Rnf138Q9CQE0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf138Q9CQE0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf138Q9CQE0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Rnf138Q9CQE0 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.26■□□□□ 0.83
Rnf138Q9CQE0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf138Q9CQE0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms