Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nck1Q99M51 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nck1Q99M51 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nck1Q99M51 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.4■□□□□ 0.86
Nck1Q99M51 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nck1Q99M51 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nck1Q99M51 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nck1Q99M51 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.39■□□□□ 0.86
Nck1Q99M51 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nck1Q99M51 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Nck1Q99M51 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nck1Q99M51 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nck1Q99M51 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Nck1Q99M51 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.39■□□□□ 0.85
Nck1Q99M51 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nck1Q99M51 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
Nck1Q99M51 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nck1Q99M51 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nck1Q99M51 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nck1Q99M51 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nck1Q99M51 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.38■□□□□ 0.85
Nck1Q99M51 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nck1Q99M51 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.38■□□□□ 0.85
Nck1Q99M51 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.38■□□□□ 0.85
Nck1Q99M51 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Nck1Q99M51 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nck1Q99M51 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nck1Q99M51 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nck1Q99M51 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.37■□□□□ 0.85
Nck1Q99M51 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nck1Q99M51 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nck1Q99M51 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nck1Q99M51 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nck1Q99M51 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Nck1Q99M51 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Nck1Q99M51 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nck1Q99M51 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck1Q99M51 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Nck1Q99M51 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nck1Q99M51 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nck1Q99M51 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck1Q99M51 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck1Q99M51 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck1Q99M51 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Nck1Q99M51 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck1Q99M51 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck1Q99M51 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck1Q99M51 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nck1Q99M51 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nck1Q99M51 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nck1Q99M51 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nck1Q99M51 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nck1Q99M51 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.34■□□□□ 0.85
Nck1Q99M51 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nck1Q99M51 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nck1Q99M51 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nck1Q99M51 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Nck1Q99M51 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.33■□□□□ 0.85
Nck1Q99M51 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nck1Q99M51 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Nck1Q99M51 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nck1Q99M51 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nck1Q99M51 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nck1Q99M51 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nck1Q99M51 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nck1Q99M51 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nck1Q99M51 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nck1Q99M51 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nck1Q99M51 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nck1Q99M51 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nck1Q99M51 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nck1Q99M51 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nck1Q99M51 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nck1Q99M51 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nck1Q99M51 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.31■□□□□ 0.84
Nck1Q99M51 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nck1Q99M51 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.3■□□□□ 0.84
Nck1Q99M51 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nck1Q99M51 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nck1Q99M51 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nck1Q99M51 Notumos-201ENSMUST00000151998 2659 ntBASIC20.3■□□□□ 0.84
Nck1Q99M51 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nck1Q99M51 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Nck1Q99M51 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nck1Q99M51 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nck1Q99M51 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.29■□□□□ 0.84
Nck1Q99M51 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nck1Q99M51 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Nck1Q99M51 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nck1Q99M51 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nck1Q99M51 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Nck1Q99M51 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nck1Q99M51 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nck1Q99M51 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.28■□□□□ 0.84
Nck1Q99M51 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nck1Q99M51 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nck1Q99M51 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nck1Q99M51 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nck1Q99M51 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nck1Q99M51 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms