Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF2Q99496 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF2Q99496 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF2Q99496 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF2Q99496 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF2Q99496 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF2Q99496 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF2Q99496 AP003733.4-201ENST00000623785 1697 ntBASIC18.71■□□□□ 0.59
RNF2Q99496 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF2Q99496 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF2Q99496 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF2Q99496 LINC00543-201ENST00000567234 1845 ntBASIC18.7■□□□□ 0.58
RNF2Q99496 AC096887.2-201ENST00000623443 1957 ntBASIC18.7■□□□□ 0.58
RNF2Q99496 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF2Q99496 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF2Q99496 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RNF2Q99496 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF2Q99496 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF2Q99496 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RNF2Q99496 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF2Q99496 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF2Q99496 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF2Q99496 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF2Q99496 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF2Q99496 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF2Q99496 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF2Q99496 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF2Q99496 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF2Q99496 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RNF2Q99496 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF2Q99496 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF2Q99496 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF2Q99496 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF2Q99496 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF2Q99496 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF2Q99496 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF2Q99496 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF2Q99496 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF2Q99496 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF2Q99496 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF2Q99496 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF2Q99496 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
RNF2Q99496 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF2Q99496 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF2Q99496 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF2Q99496 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF2Q99496 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF2Q99496 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF2Q99496 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF2Q99496 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF2Q99496 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF2Q99496 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF2Q99496 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF2Q99496 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF2Q99496 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF2Q99496 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RNF2Q99496 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF2Q99496 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF2Q99496 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.66■□□□□ 0.58
RNF2Q99496 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF2Q99496 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RNF2Q99496 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF2Q99496 AC133561.1-201ENST00000568600 2415 ntBASIC18.65■□□□□ 0.58
RNF2Q99496 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF2Q99496 AC012676.1-201ENST00000574705 1949 ntBASIC18.65■□□□□ 0.58
RNF2Q99496 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF2Q99496 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF2Q99496 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF2Q99496 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF2Q99496 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF2Q99496 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF2Q99496 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF2Q99496 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF2Q99496 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF2Q99496 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
RNF2Q99496 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF2Q99496 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
RNF2Q99496 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF2Q99496 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF2Q99496 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF2Q99496 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF2Q99496 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF2Q99496 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF2Q99496 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF2Q99496 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF2Q99496 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF2Q99496 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF2Q99496 AC060814.1-201ENST00000554326 538 ntBASIC18.63■□□□□ 0.57
RNF2Q99496 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF2Q99496 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF2Q99496 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF2Q99496 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF2Q99496 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF2Q99496 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF2Q99496 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF2Q99496 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF2Q99496 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF2Q99496 AL359504.2-201ENST00000605506 1601 ntBASIC18.62■□□□□ 0.57
RNF2Q99496 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF2Q99496 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms