Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00052Q96N35 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00052Q96N35 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.42■□□□□ 0.7
LINC00052Q96N35 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00052Q96N35 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.42■□□□□ 0.7
LINC00052Q96N35 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00052Q96N35 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
LINC00052Q96N35 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00052Q96N35 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00052Q96N35 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LINC00052Q96N35 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC00052Q96N35 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.41■□□□□ 0.7
LINC00052Q96N35 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC00052Q96N35 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LINC00052Q96N35 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00052Q96N35 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LINC00052Q96N35 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00052Q96N35 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00052Q96N35 RNF165-205ENST00000588679 2904 ntBASIC19.41■□□□□ 0.7
LINC00052Q96N35 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00052Q96N35 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.4■□□□□ 0.7
LINC00052Q96N35 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00052Q96N35 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00052Q96N35 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00052Q96N35 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00052Q96N35 DUX4L28-201ENST00000623687 678 ntBASIC19.4■□□□□ 0.7
LINC00052Q96N35 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00052Q96N35 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.4■□□□□ 0.7
LINC00052Q96N35 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.4■□□□□ 0.7
LINC00052Q96N35 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LINC00052Q96N35 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.4■□□□□ 0.7
LINC00052Q96N35 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.39■□□□□ 0.7
LINC00052Q96N35 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LINC00052Q96N35 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
LINC00052Q96N35 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00052Q96N35 AC007375.3-201ENST00000600936 2314 ntBASIC19.39■□□□□ 0.69
LINC00052Q96N35 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
LINC00052Q96N35 AC108673.1-201ENST00000510422 1159 ntBASIC19.39■□□□□ 0.69
LINC00052Q96N35 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LINC00052Q96N35 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00052Q96N35 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00052Q96N35 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.38■□□□□ 0.69
LINC00052Q96N35 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LINC00052Q96N35 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00052Q96N35 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00052Q96N35 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.38■□□□□ 0.69
LINC00052Q96N35 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.37■□□□□ 0.69
LINC00052Q96N35 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00052Q96N35 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.37■□□□□ 0.69
LINC00052Q96N35 AP006261.1-201ENST00000584783 668 ntBASIC19.37■□□□□ 0.69
LINC00052Q96N35 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00052Q96N35 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00052Q96N35 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00052Q96N35 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00052Q96N35 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00052Q96N35 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00052Q96N35 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00052Q96N35 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.36■□□□□ 0.69
LINC00052Q96N35 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.36■□□□□ 0.69
LINC00052Q96N35 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00052Q96N35 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00052Q96N35 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00052Q96N35 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.35■□□□□ 0.69
LINC00052Q96N35 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00052Q96N35 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00052Q96N35 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00052Q96N35 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00052Q96N35 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00052Q96N35 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00052Q96N35 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.35■□□□□ 0.69
LINC00052Q96N35 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00052Q96N35 AC010501.1-201ENST00000606270 1962 ntBASIC19.35■□□□□ 0.69
LINC00052Q96N35 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00052Q96N35 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00052Q96N35 AC018358.1-201ENST00000631079 1402 ntBASIC19.34■□□□□ 0.69
LINC00052Q96N35 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00052Q96N35 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
LINC00052Q96N35 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00052Q96N35 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00052Q96N35 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00052Q96N35 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.34■□□□□ 0.69
LINC00052Q96N35 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.34■□□□□ 0.69
LINC00052Q96N35 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.34■□□□□ 0.69
LINC00052Q96N35 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00052Q96N35 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LINC00052Q96N35 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00052Q96N35 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.34■□□□□ 0.69
LINC00052Q96N35 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00052Q96N35 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.34■□□□□ 0.69
LINC00052Q96N35 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00052Q96N35 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00052Q96N35 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00052Q96N35 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00052Q96N35 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00052Q96N35 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00052Q96N35 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LINC00052Q96N35 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LINC00052Q96N35 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LINC00052Q96N35 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LINC00052Q96N35 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms