Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEH1LQ96EE3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.55■□□□□ 0.88
SEH1LQ96EE3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.55■□□□□ 0.88
SEH1LQ96EE3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SEH1LQ96EE3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.55■□□□□ 0.88
SEH1LQ96EE3 AC096887.2-201ENST00000623443 1957 ntBASIC20.55■□□□□ 0.88
SEH1LQ96EE3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SEH1LQ96EE3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SEH1LQ96EE3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEH1LQ96EE3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SEH1LQ96EE3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEH1LQ96EE3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEH1LQ96EE3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.54■□□□□ 0.88
SEH1LQ96EE3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SEH1LQ96EE3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.53■□□□□ 0.88
SEH1LQ96EE3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEH1LQ96EE3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.53■□□□□ 0.88
SEH1LQ96EE3 HSD17B1P1-201ENST00000590052 955 ntBASIC20.53■□□□□ 0.88
SEH1LQ96EE3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEH1LQ96EE3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEH1LQ96EE3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SEH1LQ96EE3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SEH1LQ96EE3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.52■□□□□ 0.88
SEH1LQ96EE3 SMPD5-203ENST00000639008 1464 ntBASIC20.52■□□□□ 0.88
SEH1LQ96EE3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SEH1LQ96EE3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
SEH1LQ96EE3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.52■□□□□ 0.88
SEH1LQ96EE3 ECEL1P2-201ENST00000461596 1295 ntBASIC20.52■□□□□ 0.88
SEH1LQ96EE3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
SEH1LQ96EE3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SEH1LQ96EE3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SEH1LQ96EE3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEH1LQ96EE3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.51■□□□□ 0.87
SEH1LQ96EE3 AC025884.2-201ENST00000553429 711 ntBASIC20.51■□□□□ 0.87
SEH1LQ96EE3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SEH1LQ96EE3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEH1LQ96EE3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEH1LQ96EE3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEH1LQ96EE3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEH1LQ96EE3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEH1LQ96EE3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEH1LQ96EE3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SEH1LQ96EE3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEH1LQ96EE3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEH1LQ96EE3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
SEH1LQ96EE3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SEH1LQ96EE3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.5■□□□□ 0.87
SEH1LQ96EE3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SEH1LQ96EE3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SEH1LQ96EE3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.49■□□□□ 0.87
SEH1LQ96EE3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.49■□□□□ 0.87
SEH1LQ96EE3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.49■□□□□ 0.87
SEH1LQ96EE3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SEH1LQ96EE3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEH1LQ96EE3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEH1LQ96EE3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEH1LQ96EE3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.48■□□□□ 0.87
SEH1LQ96EE3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEH1LQ96EE3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEH1LQ96EE3 AC133561.1-201ENST00000568600 2415 ntBASIC20.47■□□□□ 0.87
SEH1LQ96EE3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEH1LQ96EE3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.47■□□□□ 0.87
SEH1LQ96EE3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.47■□□□□ 0.87
SEH1LQ96EE3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEH1LQ96EE3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEH1LQ96EE3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEH1LQ96EE3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.47■□□□□ 0.87
SEH1LQ96EE3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEH1LQ96EE3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEH1LQ96EE3 RNF126P1-201ENST00000567452 1320 ntBASIC20.47■□□□□ 0.87
SEH1LQ96EE3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEH1LQ96EE3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.47■□□□□ 0.87
SEH1LQ96EE3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.46■□□□□ 0.87
SEH1LQ96EE3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEH1LQ96EE3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
SEH1LQ96EE3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SEH1LQ96EE3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEH1LQ96EE3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.46■□□□□ 0.87
SEH1LQ96EE3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SEH1LQ96EE3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEH1LQ96EE3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SEH1LQ96EE3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.46■□□□□ 0.87
SEH1LQ96EE3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEH1LQ96EE3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SEH1LQ96EE3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEH1LQ96EE3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
SEH1LQ96EE3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEH1LQ96EE3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEH1LQ96EE3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.45■□□□□ 0.86
SEH1LQ96EE3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.45■□□□□ 0.86
SEH1LQ96EE3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEH1LQ96EE3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEH1LQ96EE3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEH1LQ96EE3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEH1LQ96EE3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEH1LQ96EE3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEH1LQ96EE3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.44■□□□□ 0.86
SEH1LQ96EE3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.44■□□□□ 0.86
SEH1LQ96EE3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.44■□□□□ 0.86
SEH1LQ96EE3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms