Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HDM4Q96D70 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 AC138932.3-201ENST00000567634 1902 ntBASIC19.47■□□□□ 0.71
R3HDM4Q96D70 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
R3HDM4Q96D70 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.46■□□□□ 0.71
R3HDM4Q96D70 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HDM4Q96D70 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.46■□□□□ 0.71
R3HDM4Q96D70 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HDM4Q96D70 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HDM4Q96D70 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
R3HDM4Q96D70 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
R3HDM4Q96D70 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HDM4Q96D70 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HDM4Q96D70 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HDM4Q96D70 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
R3HDM4Q96D70 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HDM4Q96D70 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 TSPY13P-201ENST00000338964 914 ntBASIC19.44■□□□□ 0.7
R3HDM4Q96D70 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HDM4Q96D70 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM4Q96D70 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM4Q96D70 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
R3HDM4Q96D70 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM4Q96D70 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM4Q96D70 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HDM4Q96D70 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
R3HDM4Q96D70 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 KRT18P60-201ENST00000312876 1297 ntBASIC19.42■□□□□ 0.7
R3HDM4Q96D70 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM4Q96D70 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
R3HDM4Q96D70 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 AL139125.2-201ENST00000623134 1869 ntBASIC19.4■□□□□ 0.7
R3HDM4Q96D70 AC004987.1-201ENST00000428627 508 ntBASIC19.4■□□□□ 0.7
R3HDM4Q96D70 ATP5G2P3-201ENST00000429083 425 ntBASIC19.4■□□□□ 0.7
R3HDM4Q96D70 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM4Q96D70 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
R3HDM4Q96D70 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
R3HDM4Q96D70 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM4Q96D70 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM4Q96D70 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.39■□□□□ 0.69
R3HDM4Q96D70 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.39■□□□□ 0.69
R3HDM4Q96D70 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.39■□□□□ 0.69
R3HDM4Q96D70 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.39■□□□□ 0.69
R3HDM4Q96D70 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
R3HDM4Q96D70 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
R3HDM4Q96D70 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.38■□□□□ 0.69
R3HDM4Q96D70 AC097639.1-201ENST00000565519 1891 ntBASIC19.37■□□□□ 0.69
R3HDM4Q96D70 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.37■□□□□ 0.69
R3HDM4Q96D70 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.37■□□□□ 0.69
R3HDM4Q96D70 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
R3HDM4Q96D70 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.36■□□□□ 0.69
R3HDM4Q96D70 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
R3HDM4Q96D70 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
R3HDM4Q96D70 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms