Protein–RNA interactions for Protein: Q96A46

SLC25A28, Mitoferrin-2, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A28Q96A46 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC25A28Q96A46 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC25A28Q96A46 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC25A28Q96A46 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC25A28Q96A46 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC25A28Q96A46 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC25A28Q96A46 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.57■□□□□ 0.88
SLC25A28Q96A46 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC25A28Q96A46 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC25A28Q96A46 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SLC25A28Q96A46 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC25A28Q96A46 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC25A28Q96A46 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC25A28Q96A46 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC25A28Q96A46 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC25A28Q96A46 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC25A28Q96A46 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.56■□□□□ 0.88
SLC25A28Q96A46 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC25A28Q96A46 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC25A28Q96A46 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC25A28Q96A46 SLC6A10P-202ENST00000431994 2058 ntBASIC20.56■□□□□ 0.88
SLC25A28Q96A46 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC25A28Q96A46 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC25A28Q96A46 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC25A28Q96A46 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC25A28Q96A46 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC25A28Q96A46 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC25A28Q96A46 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC25A28Q96A46 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC25A28Q96A46 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC25A28Q96A46 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC25A28Q96A46 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC25A28Q96A46 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC25A28Q96A46 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SLC25A28Q96A46 AC097639.1-201ENST00000565519 1891 ntBASIC20.54■□□□□ 0.88
SLC25A28Q96A46 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC25A28Q96A46 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC25A28Q96A46 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC25A28Q96A46 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC25A28Q96A46 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC25A28Q96A46 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC25A28Q96A46 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC25A28Q96A46 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC25A28Q96A46 AC133561.1-201ENST00000568600 2415 ntBASIC20.53■□□□□ 0.88
SLC25A28Q96A46 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC25A28Q96A46 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SLC25A28Q96A46 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC25A28Q96A46 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC25A28Q96A46 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SLC25A28Q96A46 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC25A28Q96A46 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC25A28Q96A46 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.52■□□□□ 0.88
SLC25A28Q96A46 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.52■□□□□ 0.88
SLC25A28Q96A46 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC25A28Q96A46 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
SLC25A28Q96A46 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC25A28Q96A46 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC25A28Q96A46 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC25A28Q96A46 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC25A28Q96A46 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC25A28Q96A46 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC25A28Q96A46 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC25A28Q96A46 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC25A28Q96A46 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
SLC25A28Q96A46 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC25A28Q96A46 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SLC25A28Q96A46 NTF6A-201ENST00000591175 560 ntBASIC20.5■□□□□ 0.87
SLC25A28Q96A46 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC25A28Q96A46 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC25A28Q96A46 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC25A28Q96A46 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLC25A28Q96A46 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC25A28Q96A46 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC25A28Q96A46 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
SLC25A28Q96A46 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC25A28Q96A46 LINC00543-201ENST00000567234 1845 ntBASIC20.49■□□□□ 0.87
SLC25A28Q96A46 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC25A28Q96A46 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC25A28Q96A46 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC25A28Q96A46 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC25A28Q96A46 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC25A28Q96A46 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC25A28Q96A46 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC25A28Q96A46 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC25A28Q96A46 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC25A28Q96A46 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC25A28Q96A46 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC25A28Q96A46 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC25A28Q96A46 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC25A28Q96A46 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC25A28Q96A46 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC25A28Q96A46 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC25A28Q96A46 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC25A28Q96A46 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
SLC25A28Q96A46 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC25A28Q96A46 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC25A28Q96A46 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC25A28Q96A46 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC25A28Q96A46 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SLC25A28Q96A46 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms