Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhgb2Q91XX7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdhgb2Q91XX7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgb2Q91XX7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgb2Q91XX7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhgb2Q91XX7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgb2Q91XX7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgb2Q91XX7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgb2Q91XX7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb2Q91XX7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhgb2Q91XX7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pcdhgb2Q91XX7 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.13■□□□□ 0.81
Pcdhgb2Q91XX7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb2Q91XX7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.13■□□□□ 0.81
Pcdhgb2Q91XX7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pcdhgb2Q91XX7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb2Q91XX7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb2Q91XX7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.12■□□□□ 0.81
Pcdhgb2Q91XX7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb2Q91XX7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.12■□□□□ 0.81
Pcdhgb2Q91XX7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb2Q91XX7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb2Q91XX7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhgb2Q91XX7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.11■□□□□ 0.81
Pcdhgb2Q91XX7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.11■□□□□ 0.81
Pcdhgb2Q91XX7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb2Q91XX7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Pcdhgb2Q91XX7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb2Q91XX7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
Pcdhgb2Q91XX7 Gm11599-201ENSMUST00000118720 878 ntBASIC20.1■□□□□ 0.81
Pcdhgb2Q91XX7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb2Q91XX7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb2Q91XX7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb2Q91XX7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhgb2Q91XX7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb2Q91XX7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb2Q91XX7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.09■□□□□ 0.81
Pcdhgb2Q91XX7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhgb2Q91XX7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb2Q91XX7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhgb2Q91XX7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb2Q91XX7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb2Q91XX7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pcdhgb2Q91XX7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb2Q91XX7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhgb2Q91XX7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb2Q91XX7 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.07■□□□□ 0.8
Pcdhgb2Q91XX7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb2Q91XX7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb2Q91XX7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb2Q91XX7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb2Q91XX7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb2Q91XX7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb2Q91XX7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb2Q91XX7 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.05■□□□□ 0.8
Pcdhgb2Q91XX7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.05■□□□□ 0.8
Pcdhgb2Q91XX7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pcdhgb2Q91XX7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb2Q91XX7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhgb2Q91XX7 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.04■□□□□ 0.8
Pcdhgb2Q91XX7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb2Q91XX7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb2Q91XX7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhgb2Q91XX7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb2Q91XX7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb2Q91XX7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb2Q91XX7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb2Q91XX7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdhgb2Q91XX7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb2Q91XX7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb2Q91XX7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb2Q91XX7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdhgb2Q91XX7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Pcdhgb2Q91XX7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb2Q91XX7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.02■□□□□ 0.8
Pcdhgb2Q91XX7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb2Q91XX7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb2Q91XX7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhgb2Q91XX7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Pcdhgb2Q91XX7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb2Q91XX7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb2Q91XX7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhgb2Q91XX7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.01■□□□□ 0.79
Pcdhgb2Q91XX7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhgb2Q91XX7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhgb2Q91XX7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhgb2Q91XX7 Hsf1-207ENSMUST00000228371 2102 ntBASIC20■□□□□ 0.79
Pcdhgb2Q91XX7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb2Q91XX7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb2Q91XX7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb2Q91XX7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdhgb2Q91XX7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb2Q91XX7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Pcdhgb2Q91XX7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhgb2Q91XX7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhgb2Q91XX7 Gm44428-201ENSMUST00000204474 874 ntBASIC19.98■□□□□ 0.79
Pcdhgb2Q91XX7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhgb2Q91XX7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhgb2Q91XX7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcdhgb2Q91XX7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms