Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx41Q91VN6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC24.53■■□□□ 1.52
Ddx41Q91VN6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx41Q91VN6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx41Q91VN6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx41Q91VN6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx41Q91VN6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx41Q91VN6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx41Q91VN6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.52■■□□□ 1.52
Ddx41Q91VN6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx41Q91VN6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx41Q91VN6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx41Q91VN6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
Ddx41Q91VN6 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.51■■□□□ 1.51
Ddx41Q91VN6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC24.51■■□□□ 1.51
Ddx41Q91VN6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.51■■□□□ 1.51
Ddx41Q91VN6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx41Q91VN6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx41Q91VN6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx41Q91VN6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx41Q91VN6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.5■■□□□ 1.51
Ddx41Q91VN6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx41Q91VN6 Gm18755-201ENSMUST00000218030 1099 ntBASIC24.5■■□□□ 1.51
Ddx41Q91VN6 Rps24-207ENSMUST00000224568 714 ntBASIC24.5■■□□□ 1.51
Ddx41Q91VN6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Ddx41Q91VN6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Ddx41Q91VN6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC24.5■■□□□ 1.51
Ddx41Q91VN6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx41Q91VN6 Gm45102-201ENSMUST00000207427 857 ntBASIC24.49■■□□□ 1.51
Ddx41Q91VN6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Ddx41Q91VN6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC24.49■■□□□ 1.51
Ddx41Q91VN6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Ddx41Q91VN6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx41Q91VN6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx41Q91VN6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx41Q91VN6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC24.48■■□□□ 1.51
Ddx41Q91VN6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx41Q91VN6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx41Q91VN6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx41Q91VN6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx41Q91VN6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx41Q91VN6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.47■■□□□ 1.51
Ddx41Q91VN6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx41Q91VN6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx41Q91VN6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Ddx41Q91VN6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx41Q91VN6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Ddx41Q91VN6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.46■■□□□ 1.51
Ddx41Q91VN6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx41Q91VN6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Ddx41Q91VN6 Notumos-201ENSMUST00000151998 2659 ntBASIC24.45■■□□□ 1.5
Ddx41Q91VN6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx41Q91VN6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx41Q91VN6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx41Q91VN6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx41Q91VN6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx41Q91VN6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx41Q91VN6 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.45■■□□□ 1.5
Ddx41Q91VN6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
Ddx41Q91VN6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx41Q91VN6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Ddx41Q91VN6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx41Q91VN6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.44■■□□□ 1.5
Ddx41Q91VN6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx41Q91VN6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx41Q91VN6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx41Q91VN6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx41Q91VN6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.43■■□□□ 1.5
Ddx41Q91VN6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx41Q91VN6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Ddx41Q91VN6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx41Q91VN6 Gm14117-201ENSMUST00000122417 843 ntBASIC24.42■■□□□ 1.5
Ddx41Q91VN6 Gm9959-201ENSMUST00000068277 390 ntBASIC24.42■■□□□ 1.5
Ddx41Q91VN6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Ddx41Q91VN6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx41Q91VN6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx41Q91VN6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Ddx41Q91VN6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Ddx41Q91VN6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx41Q91VN6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx41Q91VN6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.41■■□□□ 1.5
Ddx41Q91VN6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.41■■□□□ 1.5
Ddx41Q91VN6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC24.41■■□□□ 1.5
Ddx41Q91VN6 Gm10232-201ENSMUST00000089221 720 ntBASIC24.41■■□□□ 1.5
Ddx41Q91VN6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx41Q91VN6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx41Q91VN6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx41Q91VN6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.4■■□□□ 1.5
Ddx41Q91VN6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Ddx41Q91VN6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx41Q91VN6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx41Q91VN6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx41Q91VN6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx41Q91VN6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
Ddx41Q91VN6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Ddx41Q91VN6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ddx41Q91VN6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ddx41Q91VN6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.39■■□□□ 1.49
Ddx41Q91VN6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ddx41Q91VN6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms