Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.91■■□□□ 1.9
RETREG2Q8NC44 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
RETREG2Q8NC44 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RETREG2Q8NC44 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
RETREG2Q8NC44 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.9■■□□□ 1.9
RETREG2Q8NC44 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RETREG2Q8NC44 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RETREG2Q8NC44 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
RETREG2Q8NC44 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RETREG2Q8NC44 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.9■■□□□ 1.9
RETREG2Q8NC44 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.9■■□□□ 1.9
RETREG2Q8NC44 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.9■■□□□ 1.9
RETREG2Q8NC44 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RETREG2Q8NC44 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RETREG2Q8NC44 AC135731.1-201ENST00000569415 2548 ntBASIC26.89■■□□□ 1.89
RETREG2Q8NC44 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RETREG2Q8NC44 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RETREG2Q8NC44 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.88■■□□□ 1.89
RETREG2Q8NC44 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RETREG2Q8NC44 Z92544.1-202ENST00000571933 1220 ntBASIC26.88■■□□□ 1.89
RETREG2Q8NC44 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RETREG2Q8NC44 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.88■■□□□ 1.89
RETREG2Q8NC44 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
RETREG2Q8NC44 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RETREG2Q8NC44 LONRF2P2-201ENST00000439212 571 ntBASIC26.87■■□□□ 1.89
RETREG2Q8NC44 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RETREG2Q8NC44 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RETREG2Q8NC44 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RETREG2Q8NC44 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.87■■□□□ 1.89
RETREG2Q8NC44 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.86■■□□□ 1.89
RETREG2Q8NC44 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RETREG2Q8NC44 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RETREG2Q8NC44 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RETREG2Q8NC44 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RETREG2Q8NC44 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.86■■□□□ 1.89
RETREG2Q8NC44 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RETREG2Q8NC44 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RETREG2Q8NC44 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
RETREG2Q8NC44 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RETREG2Q8NC44 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RETREG2Q8NC44 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
RETREG2Q8NC44 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.84■■□□□ 1.89
RETREG2Q8NC44 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.84■■□□□ 1.89
RETREG2Q8NC44 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RETREG2Q8NC44 AC020928.2-201ENST00000588717 2197 ntBASIC26.84■■□□□ 1.89
RETREG2Q8NC44 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RETREG2Q8NC44 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RETREG2Q8NC44 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RETREG2Q8NC44 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.83■■□□□ 1.89
RETREG2Q8NC44 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RETREG2Q8NC44 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.83■■□□□ 1.89
RETREG2Q8NC44 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.83■■□□□ 1.88
RETREG2Q8NC44 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.82■■□□□ 1.88
RETREG2Q8NC44 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RETREG2Q8NC44 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.82■■□□□ 1.88
RETREG2Q8NC44 KRT18P10-201ENST00000388836 1287 ntBASIC26.82■■□□□ 1.88
RETREG2Q8NC44 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RETREG2Q8NC44 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.82■■□□□ 1.88
RETREG2Q8NC44 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.82■■□□□ 1.88
RETREG2Q8NC44 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RETREG2Q8NC44 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RETREG2Q8NC44 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
RETREG2Q8NC44 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RETREG2Q8NC44 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RETREG2Q8NC44 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.81■■□□□ 1.88
RETREG2Q8NC44 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RETREG2Q8NC44 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RETREG2Q8NC44 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RETREG2Q8NC44 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RETREG2Q8NC44 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RETREG2Q8NC44 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
RETREG2Q8NC44 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
RETREG2Q8NC44 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RETREG2Q8NC44 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
RETREG2Q8NC44 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RETREG2Q8NC44 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RETREG2Q8NC44 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
RETREG2Q8NC44 KRT125P-201ENST00000546827 989 ntBASIC26.79■■□□□ 1.88
RETREG2Q8NC44 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.79■■□□□ 1.88
RETREG2Q8NC44 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RETREG2Q8NC44 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.79■■□□□ 1.88
RETREG2Q8NC44 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
RETREG2Q8NC44 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RETREG2Q8NC44 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.78■■□□□ 1.88
RETREG2Q8NC44 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.78■■□□□ 1.88
RETREG2Q8NC44 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.78■■□□□ 1.88
RETREG2Q8NC44 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RETREG2Q8NC44 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.78■■□□□ 1.88
RETREG2Q8NC44 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
RETREG2Q8NC44 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
RETREG2Q8NC44 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
RETREG2Q8NC44 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RETREG2Q8NC44 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.77■■□□□ 1.88
RETREG2Q8NC44 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RETREG2Q8NC44 AC008406.3-201ENST00000620001 1374 ntBASIC26.77■■□□□ 1.88
RETREG2Q8NC44 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RETREG2Q8NC44 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RETREG2Q8NC44 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
RETREG2Q8NC44 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.77■■□□□ 1.88
RETREG2Q8NC44 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms