Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC32.84■■■□□ 2.85
Abca8bQ8K440 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Abca8bQ8K440 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC32.84■■■□□ 2.85
Abca8bQ8K440 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Abca8bQ8K440 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Abca8bQ8K440 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Abca8bQ8K440 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC32.83■■■□□ 2.85
Abca8bQ8K440 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Abca8bQ8K440 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
Abca8bQ8K440 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC32.82■■■□□ 2.84
Abca8bQ8K440 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
Abca8bQ8K440 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Abca8bQ8K440 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Abca8bQ8K440 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Abca8bQ8K440 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Abca8bQ8K440 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Abca8bQ8K440 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Abca8bQ8K440 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC32.79■■■□□ 2.84
Abca8bQ8K440 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC32.78■■■□□ 2.84
Abca8bQ8K440 Flvcr1-202ENSMUST00000191946 1216 ntBASIC32.78■■■□□ 2.84
Abca8bQ8K440 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
Abca8bQ8K440 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Abca8bQ8K440 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
Abca8bQ8K440 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
Abca8bQ8K440 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Abca8bQ8K440 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Abca8bQ8K440 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC32.77■■■□□ 2.84
Abca8bQ8K440 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC32.76■■■□□ 2.83
Abca8bQ8K440 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Abca8bQ8K440 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Abca8bQ8K440 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Abca8bQ8K440 Gm10620-201ENSMUST00000098379 1332 ntBASIC32.74■■■□□ 2.83
Abca8bQ8K440 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Abca8bQ8K440 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
Abca8bQ8K440 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Abca8bQ8K440 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Abca8bQ8K440 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC32.74■■■□□ 2.83
Abca8bQ8K440 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
Abca8bQ8K440 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Abca8bQ8K440 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Abca8bQ8K440 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Abca8bQ8K440 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
Abca8bQ8K440 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Abca8bQ8K440 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Abca8bQ8K440 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC32.72■■■□□ 2.83
Abca8bQ8K440 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Abca8bQ8K440 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC32.71■■■□□ 2.83
Abca8bQ8K440 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Abca8bQ8K440 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Abca8bQ8K440 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC32.7■■■□□ 2.83
Abca8bQ8K440 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Abca8bQ8K440 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Abca8bQ8K440 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC32.69■■■□□ 2.82
Abca8bQ8K440 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Abca8bQ8K440 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
Abca8bQ8K440 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Abca8bQ8K440 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Abca8bQ8K440 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Abca8bQ8K440 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Abca8bQ8K440 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
Abca8bQ8K440 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Abca8bQ8K440 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Abca8bQ8K440 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Abca8bQ8K440 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC32.66■■■□□ 2.82
Abca8bQ8K440 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC32.66■■■□□ 2.82
Abca8bQ8K440 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Abca8bQ8K440 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Abca8bQ8K440 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC32.65■■■□□ 2.82
Abca8bQ8K440 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Abca8bQ8K440 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Abca8bQ8K440 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Abca8bQ8K440 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC32.65■■■□□ 2.82
Abca8bQ8K440 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Abca8bQ8K440 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC32.64■■■□□ 2.82
Abca8bQ8K440 Gm28731-201ENSMUST00000185564 1569 ntBASIC32.64■■■□□ 2.82
Abca8bQ8K440 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC32.64■■■□□ 2.82
Abca8bQ8K440 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC32.64■■■□□ 2.82
Abca8bQ8K440 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Abca8bQ8K440 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC32.63■■■□□ 2.81
Abca8bQ8K440 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC32.63■■■□□ 2.81
Abca8bQ8K440 Gm6139-201ENSMUST00000079261 882 ntBASIC32.63■■■□□ 2.81
Abca8bQ8K440 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Abca8bQ8K440 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC32.63■■■□□ 2.81
Abca8bQ8K440 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC32.62■■■□□ 2.81
Abca8bQ8K440 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC32.62■■■□□ 2.81
Abca8bQ8K440 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Abca8bQ8K440 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
Abca8bQ8K440 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Abca8bQ8K440 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Abca8bQ8K440 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Abca8bQ8K440 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Abca8bQ8K440 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Abca8bQ8K440 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Abca8bQ8K440 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC32.61■■■□□ 2.81
Abca8bQ8K440 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Abca8bQ8K440 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC32.61■■■□□ 2.81
Abca8bQ8K440 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Abca8bQ8K440 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC32.6■■■□□ 2.81
Abca8bQ8K440 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Abca8bQ8K440 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms