Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SMC5Q8IY18 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
SMC5Q8IY18 AP003733.4-201ENST00000623785 1697 ntBASIC29.57■■■□□ 2.32
SMC5Q8IY18 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SMC5Q8IY18 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC29.57■■■□□ 2.32
SMC5Q8IY18 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SMC5Q8IY18 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SMC5Q8IY18 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
SMC5Q8IY18 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SMC5Q8IY18 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC29.56■■■□□ 2.32
SMC5Q8IY18 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SMC5Q8IY18 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SMC5Q8IY18 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.55■■■□□ 2.32
SMC5Q8IY18 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SMC5Q8IY18 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SMC5Q8IY18 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SMC5Q8IY18 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SMC5Q8IY18 EED-207ENST00000528180 1745 ntTSL 5 BASIC29.54■■■□□ 2.32
SMC5Q8IY18 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SMC5Q8IY18 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC29.53■■■□□ 2.32
SMC5Q8IY18 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SMC5Q8IY18 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC29.53■■■□□ 2.32
SMC5Q8IY18 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SMC5Q8IY18 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
SMC5Q8IY18 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SMC5Q8IY18 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.51■■■□□ 2.31
SMC5Q8IY18 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC29.5■■■□□ 2.31
SMC5Q8IY18 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SMC5Q8IY18 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SMC5Q8IY18 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
SMC5Q8IY18 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
SMC5Q8IY18 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
SMC5Q8IY18 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
SMC5Q8IY18 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
SMC5Q8IY18 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SMC5Q8IY18 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SMC5Q8IY18 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC29.47■■■□□ 2.31
SMC5Q8IY18 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SMC5Q8IY18 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SMC5Q8IY18 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SMC5Q8IY18 AC009831.1-201ENST00000580420 1582 ntBASIC29.47■■■□□ 2.31
SMC5Q8IY18 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC29.46■■■□□ 2.31
SMC5Q8IY18 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SMC5Q8IY18 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SMC5Q8IY18 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.46■■■□□ 2.31
SMC5Q8IY18 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC29.46■■■□□ 2.31
SMC5Q8IY18 RNF126P1-201ENST00000567452 1320 ntBASIC29.45■■■□□ 2.31
SMC5Q8IY18 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SMC5Q8IY18 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
SMC5Q8IY18 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.45■■■□□ 2.31
SMC5Q8IY18 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
SMC5Q8IY18 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SMC5Q8IY18 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
SMC5Q8IY18 MIR6089-201ENST00000616698 64 ntBASIC29.44■■■□□ 2.3
SMC5Q8IY18 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SMC5Q8IY18 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC29.44■■■□□ 2.3
SMC5Q8IY18 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SMC5Q8IY18 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SMC5Q8IY18 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SMC5Q8IY18 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC29.43■■■□□ 2.3
SMC5Q8IY18 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SMC5Q8IY18 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC29.43■■■□□ 2.3
SMC5Q8IY18 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SMC5Q8IY18 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
SMC5Q8IY18 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SMC5Q8IY18 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SMC5Q8IY18 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SMC5Q8IY18 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
SMC5Q8IY18 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SMC5Q8IY18 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SMC5Q8IY18 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC29.42■■■□□ 2.3
SMC5Q8IY18 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC29.41■■■□□ 2.3
SMC5Q8IY18 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SMC5Q8IY18 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMC5Q8IY18 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SMC5Q8IY18 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMC5Q8IY18 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMC5Q8IY18 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMC5Q8IY18 LINC01124-201ENST00000409786 2117 ntBASIC29.4■■■□□ 2.3
SMC5Q8IY18 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SMC5Q8IY18 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC29.4■■■□□ 2.3
SMC5Q8IY18 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMC5Q8IY18 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
SMC5Q8IY18 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SMC5Q8IY18 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SMC5Q8IY18 HES4-204ENST00000484667 667 ntTSL 3 BASIC29.39■■■□□ 2.3
SMC5Q8IY18 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.39■■■□□ 2.3
SMC5Q8IY18 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.3
SMC5Q8IY18 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SMC5Q8IY18 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SMC5Q8IY18 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SMC5Q8IY18 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.38■■■□□ 2.29
SMC5Q8IY18 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
SMC5Q8IY18 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.38■■■□□ 2.29
SMC5Q8IY18 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SMC5Q8IY18 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SMC5Q8IY18 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SMC5Q8IY18 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SMC5Q8IY18 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SMC5Q8IY18 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms