Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.48■■□□□ 1.51
Depdc1aQ8CIG0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Depdc1aQ8CIG0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.48■■□□□ 1.51
Depdc1aQ8CIG0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Depdc1aQ8CIG0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Depdc1aQ8CIG0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Depdc1aQ8CIG0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Depdc1aQ8CIG0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Depdc1aQ8CIG0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Depdc1aQ8CIG0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Depdc1aQ8CIG0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Depdc1aQ8CIG0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.46■■□□□ 1.51
Depdc1aQ8CIG0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.46■■□□□ 1.51
Depdc1aQ8CIG0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Depdc1aQ8CIG0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Depdc1aQ8CIG0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Depdc1aQ8CIG0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.45■■□□□ 1.5
Depdc1aQ8CIG0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Depdc1aQ8CIG0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Depdc1aQ8CIG0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Depdc1aQ8CIG0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Depdc1aQ8CIG0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Depdc1aQ8CIG0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Depdc1aQ8CIG0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Depdc1aQ8CIG0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Depdc1aQ8CIG0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Depdc1aQ8CIG0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Depdc1aQ8CIG0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Depdc1aQ8CIG0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Depdc1aQ8CIG0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Depdc1aQ8CIG0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Depdc1aQ8CIG0 Etf1-202ENSMUST00000180351 108 ntBASIC24.43■■□□□ 1.5
Depdc1aQ8CIG0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.43■■□□□ 1.5
Depdc1aQ8CIG0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.43■■□□□ 1.5
Depdc1aQ8CIG0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Depdc1aQ8CIG0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Depdc1aQ8CIG0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Depdc1aQ8CIG0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.42■■□□□ 1.5
Depdc1aQ8CIG0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Depdc1aQ8CIG0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Depdc1aQ8CIG0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.41■■□□□ 1.5
Depdc1aQ8CIG0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC24.41■■□□□ 1.5
Depdc1aQ8CIG0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Depdc1aQ8CIG0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Depdc1aQ8CIG0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Depdc1aQ8CIG0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Depdc1aQ8CIG0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Depdc1aQ8CIG0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Depdc1aQ8CIG0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Depdc1aQ8CIG0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
Depdc1aQ8CIG0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC24.39■■□□□ 1.49
Depdc1aQ8CIG0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Depdc1aQ8CIG0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Depdc1aQ8CIG0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
Depdc1aQ8CIG0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Depdc1aQ8CIG0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.38■■□□□ 1.49
Depdc1aQ8CIG0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Depdc1aQ8CIG0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Depdc1aQ8CIG0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Depdc1aQ8CIG0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Depdc1aQ8CIG0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Depdc1aQ8CIG0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Depdc1aQ8CIG0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
Depdc1aQ8CIG0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Depdc1aQ8CIG0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Depdc1aQ8CIG0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.37■■□□□ 1.49
Depdc1aQ8CIG0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Depdc1aQ8CIG0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Depdc1aQ8CIG0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Depdc1aQ8CIG0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.36■■□□□ 1.49
Depdc1aQ8CIG0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Depdc1aQ8CIG0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Depdc1aQ8CIG0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC24.36■■□□□ 1.49
Depdc1aQ8CIG0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.36■■□□□ 1.49
Depdc1aQ8CIG0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Depdc1aQ8CIG0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Depdc1aQ8CIG0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Depdc1aQ8CIG0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Depdc1aQ8CIG0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Depdc1aQ8CIG0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Depdc1aQ8CIG0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Depdc1aQ8CIG0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Depdc1aQ8CIG0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Depdc1aQ8CIG0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.34■■□□□ 1.49
Depdc1aQ8CIG0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Depdc1aQ8CIG0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
Depdc1aQ8CIG0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Depdc1aQ8CIG0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Depdc1aQ8CIG0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Depdc1aQ8CIG0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.33■■□□□ 1.49
Depdc1aQ8CIG0 Gm40881-201ENSMUST00000223397 166 ntBASIC24.33■■□□□ 1.49
Depdc1aQ8CIG0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Depdc1aQ8CIG0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Depdc1aQ8CIG0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Depdc1aQ8CIG0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Depdc1aQ8CIG0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Depdc1aQ8CIG0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Depdc1aQ8CIG0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Depdc1aQ8CIG0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Depdc1aQ8CIG0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms