Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Brat1Q8C3R1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Brat1Q8C3R1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Brat1Q8C3R1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.7■■□□□ 1.22
Brat1Q8C3R1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Brat1Q8C3R1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Brat1Q8C3R1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Brat1Q8C3R1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Brat1Q8C3R1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Brat1Q8C3R1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Brat1Q8C3R1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Brat1Q8C3R1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Brat1Q8C3R1 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.69■■□□□ 1.22
Brat1Q8C3R1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Brat1Q8C3R1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Brat1Q8C3R1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Brat1Q8C3R1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Brat1Q8C3R1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Brat1Q8C3R1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Brat1Q8C3R1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Brat1Q8C3R1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Brat1Q8C3R1 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.68■■□□□ 1.22
Brat1Q8C3R1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.68■■□□□ 1.22
Brat1Q8C3R1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Brat1Q8C3R1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Brat1Q8C3R1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Brat1Q8C3R1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Brat1Q8C3R1 Gm15546-201ENSMUST00000122095 826 ntBASIC22.67■■□□□ 1.22
Brat1Q8C3R1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Brat1Q8C3R1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Brat1Q8C3R1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Brat1Q8C3R1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.66■■□□□ 1.22
Brat1Q8C3R1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Brat1Q8C3R1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Brat1Q8C3R1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Brat1Q8C3R1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Brat1Q8C3R1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Brat1Q8C3R1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Brat1Q8C3R1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Brat1Q8C3R1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Brat1Q8C3R1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Brat1Q8C3R1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Brat1Q8C3R1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.22
Brat1Q8C3R1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.64■■□□□ 1.22
Brat1Q8C3R1 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.64■■□□□ 1.21
Brat1Q8C3R1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Brat1Q8C3R1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.64■■□□□ 1.21
Brat1Q8C3R1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.64■■□□□ 1.21
Brat1Q8C3R1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Brat1Q8C3R1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Brat1Q8C3R1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Brat1Q8C3R1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Brat1Q8C3R1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Brat1Q8C3R1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Brat1Q8C3R1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Brat1Q8C3R1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Brat1Q8C3R1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Brat1Q8C3R1 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.62■■□□□ 1.21
Brat1Q8C3R1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Brat1Q8C3R1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
Brat1Q8C3R1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Brat1Q8C3R1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Brat1Q8C3R1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Brat1Q8C3R1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Brat1Q8C3R1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Brat1Q8C3R1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Brat1Q8C3R1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Brat1Q8C3R1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.61■■□□□ 1.21
Brat1Q8C3R1 Gm15820-201ENSMUST00000201566 728 ntBASIC22.61■■□□□ 1.21
Brat1Q8C3R1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Brat1Q8C3R1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Brat1Q8C3R1 Gm10232-201ENSMUST00000089221 720 ntBASIC22.61■■□□□ 1.21
Brat1Q8C3R1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Brat1Q8C3R1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Brat1Q8C3R1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Brat1Q8C3R1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.6■■□□□ 1.21
Brat1Q8C3R1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Brat1Q8C3R1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Brat1Q8C3R1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Brat1Q8C3R1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Brat1Q8C3R1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Brat1Q8C3R1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
Brat1Q8C3R1 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.58■■□□□ 1.21
Brat1Q8C3R1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Brat1Q8C3R1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Brat1Q8C3R1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
Brat1Q8C3R1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.57■■□□□ 1.2
Brat1Q8C3R1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Brat1Q8C3R1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Brat1Q8C3R1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Brat1Q8C3R1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Brat1Q8C3R1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Brat1Q8C3R1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Brat1Q8C3R1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.57■■□□□ 1.2
Brat1Q8C3R1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Brat1Q8C3R1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Brat1Q8C3R1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Brat1Q8C3R1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Brat1Q8C3R1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Brat1Q8C3R1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms