Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.37■■□□□ 1.17
Sh3rf3Q8C120 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh3rf3Q8C120 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh3rf3Q8C120 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh3rf3Q8C120 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh3rf3Q8C120 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3rf3Q8C120 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3rf3Q8C120 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3rf3Q8C120 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
Sh3rf3Q8C120 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Sh3rf3Q8C120 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sh3rf3Q8C120 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sh3rf3Q8C120 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.32■■□□□ 1.16
Sh3rf3Q8C120 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3rf3Q8C120 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3rf3Q8C120 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.32■■□□□ 1.16
Sh3rf3Q8C120 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3rf3Q8C120 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3rf3Q8C120 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3rf3Q8C120 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3rf3Q8C120 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.3■■□□□ 1.16
Sh3rf3Q8C120 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3rf3Q8C120 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3rf3Q8C120 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3rf3Q8C120 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.29■■□□□ 1.16
Sh3rf3Q8C120 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3rf3Q8C120 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3rf3Q8C120 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3rf3Q8C120 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3rf3Q8C120 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Sh3rf3Q8C120 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3rf3Q8C120 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Sh3rf3Q8C120 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3rf3Q8C120 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.28■■□□□ 1.16
Sh3rf3Q8C120 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3rf3Q8C120 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3rf3Q8C120 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3rf3Q8C120 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Sh3rf3Q8C120 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Sh3rf3Q8C120 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.25■■□□□ 1.15
Sh3rf3Q8C120 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3rf3Q8C120 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Sh3rf3Q8C120 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Sh3rf3Q8C120 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.25■■□□□ 1.15
Sh3rf3Q8C120 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3rf3Q8C120 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3rf3Q8C120 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3rf3Q8C120 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3rf3Q8C120 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms