Protein–RNA interactions for Protein: Q8BYM7

Rsph4a, Radial spoke head protein 4 homolog A, mousemouse

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph4aQ8BYM7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rsph4aQ8BYM7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC31.26■■■□□ 2.6
Rsph4aQ8BYM7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Rsph4aQ8BYM7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rsph4aQ8BYM7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Rsph4aQ8BYM7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
Rsph4aQ8BYM7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rsph4aQ8BYM7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rsph4aQ8BYM7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Rsph4aQ8BYM7 Gm18284-201ENSMUST00000172604 624 ntBASIC31.25■■■□□ 2.59
Rsph4aQ8BYM7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Rsph4aQ8BYM7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rsph4aQ8BYM7 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rsph4aQ8BYM7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Rsph4aQ8BYM7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rsph4aQ8BYM7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC31.23■■■□□ 2.59
Rsph4aQ8BYM7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rsph4aQ8BYM7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rsph4aQ8BYM7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC31.22■■■□□ 2.59
Rsph4aQ8BYM7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Rsph4aQ8BYM7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rsph4aQ8BYM7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rsph4aQ8BYM7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rsph4aQ8BYM7 Gm10620-201ENSMUST00000098379 1332 ntBASIC31.22■■■□□ 2.59
Rsph4aQ8BYM7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rsph4aQ8BYM7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC31.21■■■□□ 2.59
Rsph4aQ8BYM7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rsph4aQ8BYM7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
Rsph4aQ8BYM7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rsph4aQ8BYM7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rsph4aQ8BYM7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC31.2■■■□□ 2.59
Rsph4aQ8BYM7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Rsph4aQ8BYM7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Rsph4aQ8BYM7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Rsph4aQ8BYM7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Rsph4aQ8BYM7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Rsph4aQ8BYM7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Rsph4aQ8BYM7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Rsph4aQ8BYM7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
Rsph4aQ8BYM7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rsph4aQ8BYM7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Rsph4aQ8BYM7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Rsph4aQ8BYM7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rsph4aQ8BYM7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Rsph4aQ8BYM7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Rsph4aQ8BYM7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Rsph4aQ8BYM7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC31.16■■■□□ 2.58
Rsph4aQ8BYM7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC31.16■■■□□ 2.58
Rsph4aQ8BYM7 Gm28731-201ENSMUST00000185564 1569 ntBASIC31.16■■■□□ 2.58
Rsph4aQ8BYM7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
Rsph4aQ8BYM7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Rsph4aQ8BYM7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC31.15■■■□□ 2.58
Rsph4aQ8BYM7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rsph4aQ8BYM7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC31.14■■■□□ 2.58
Rsph4aQ8BYM7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC31.14■■■□□ 2.58
Rsph4aQ8BYM7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Rsph4aQ8BYM7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC31.13■■■□□ 2.57
Rsph4aQ8BYM7 Gm9207-201ENSMUST00000198773 1115 ntBASIC31.13■■■□□ 2.57
Rsph4aQ8BYM7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Rsph4aQ8BYM7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rsph4aQ8BYM7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rsph4aQ8BYM7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC31.11■■■□□ 2.57
Rsph4aQ8BYM7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Rsph4aQ8BYM7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rsph4aQ8BYM7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Rsph4aQ8BYM7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC31.1■■■□□ 2.57
Rsph4aQ8BYM7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rsph4aQ8BYM7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rsph4aQ8BYM7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Rsph4aQ8BYM7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rsph4aQ8BYM7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rsph4aQ8BYM7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC31.08■■■□□ 2.57
Rsph4aQ8BYM7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Rsph4aQ8BYM7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Rsph4aQ8BYM7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Rsph4aQ8BYM7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC31.07■■■□□ 2.56
Rsph4aQ8BYM7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Rsph4aQ8BYM7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Rsph4aQ8BYM7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Rsph4aQ8BYM7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
Rsph4aQ8BYM7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC31.06■■■□□ 2.56
Rsph4aQ8BYM7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Rsph4aQ8BYM7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Rsph4aQ8BYM7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Rsph4aQ8BYM7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Rsph4aQ8BYM7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Rsph4aQ8BYM7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC31.04■■■□□ 2.56
Rsph4aQ8BYM7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC31.04■■■□□ 2.56
Rsph4aQ8BYM7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC31.04■■■□□ 2.56
Rsph4aQ8BYM7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
Rsph4aQ8BYM7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Rsph4aQ8BYM7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Rsph4aQ8BYM7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Rsph4aQ8BYM7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rsph4aQ8BYM7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rsph4aQ8BYM7 Gm6139-201ENSMUST00000079261 882 ntBASIC31.03■■■□□ 2.56
Rsph4aQ8BYM7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rsph4aQ8BYM7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rsph4aQ8BYM7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Rsph4aQ8BYM7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms