Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdk5rap1Q8BTW8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdk5rap1Q8BTW8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdk5rap1Q8BTW8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdk5rap1Q8BTW8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Cdk5rap1Q8BTW8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Cdk5rap1Q8BTW8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.39■□□□□ 0.86
Cdk5rap1Q8BTW8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdk5rap1Q8BTW8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdk5rap1Q8BTW8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdk5rap1Q8BTW8 Etf1-202ENSMUST00000180351 108 ntBASIC20.39■□□□□ 0.85
Cdk5rap1Q8BTW8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.39■□□□□ 0.85
Cdk5rap1Q8BTW8 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.39■□□□□ 0.85
Cdk5rap1Q8BTW8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.39■□□□□ 0.85
Cdk5rap1Q8BTW8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdk5rap1Q8BTW8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdk5rap1Q8BTW8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdk5rap1Q8BTW8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdk5rap1Q8BTW8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cdk5rap1Q8BTW8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cdk5rap1Q8BTW8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.38■□□□□ 0.85
Cdk5rap1Q8BTW8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdk5rap1Q8BTW8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.37■□□□□ 0.85
Cdk5rap1Q8BTW8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.37■□□□□ 0.85
Cdk5rap1Q8BTW8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk5rap1Q8BTW8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk5rap1Q8BTW8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdk5rap1Q8BTW8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk5rap1Q8BTW8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cdk5rap1Q8BTW8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk5rap1Q8BTW8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.36■□□□□ 0.85
Cdk5rap1Q8BTW8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk5rap1Q8BTW8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdk5rap1Q8BTW8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.35■□□□□ 0.85
Cdk5rap1Q8BTW8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.35■□□□□ 0.85
Cdk5rap1Q8BTW8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk5rap1Q8BTW8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk5rap1Q8BTW8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk5rap1Q8BTW8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.35■□□□□ 0.85
Cdk5rap1Q8BTW8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cdk5rap1Q8BTW8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.35■□□□□ 0.85
Cdk5rap1Q8BTW8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk5rap1Q8BTW8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdk5rap1Q8BTW8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk5rap1Q8BTW8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk5rap1Q8BTW8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.34■□□□□ 0.85
Cdk5rap1Q8BTW8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdk5rap1Q8BTW8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cdk5rap1Q8BTW8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdk5rap1Q8BTW8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.33■□□□□ 0.85
Cdk5rap1Q8BTW8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdk5rap1Q8BTW8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.33■□□□□ 0.85
Cdk5rap1Q8BTW8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdk5rap1Q8BTW8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdk5rap1Q8BTW8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.33■□□□□ 0.84
Cdk5rap1Q8BTW8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdk5rap1Q8BTW8 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.33■□□□□ 0.84
Cdk5rap1Q8BTW8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cdk5rap1Q8BTW8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdk5rap1Q8BTW8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdk5rap1Q8BTW8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdk5rap1Q8BTW8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.32■□□□□ 0.84
Cdk5rap1Q8BTW8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdk5rap1Q8BTW8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdk5rap1Q8BTW8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk5rap1Q8BTW8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk5rap1Q8BTW8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Cdk5rap1Q8BTW8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk5rap1Q8BTW8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdk5rap1Q8BTW8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.3■□□□□ 0.84
Cdk5rap1Q8BTW8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cdk5rap1Q8BTW8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdk5rap1Q8BTW8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdk5rap1Q8BTW8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdk5rap1Q8BTW8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdk5rap1Q8BTW8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdk5rap1Q8BTW8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdk5rap1Q8BTW8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdk5rap1Q8BTW8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdk5rap1Q8BTW8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.29■□□□□ 0.84
Cdk5rap1Q8BTW8 Gm7417-201ENSMUST00000192950 473 ntBASIC20.29■□□□□ 0.84
Cdk5rap1Q8BTW8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.29■□□□□ 0.84
Cdk5rap1Q8BTW8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdk5rap1Q8BTW8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdk5rap1Q8BTW8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdk5rap1Q8BTW8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdk5rap1Q8BTW8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdk5rap1Q8BTW8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cdk5rap1Q8BTW8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdk5rap1Q8BTW8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.28■□□□□ 0.84
Cdk5rap1Q8BTW8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.28■□□□□ 0.84
Cdk5rap1Q8BTW8 Gm10399-202ENSMUST00000202768 748 ntBASIC20.28■□□□□ 0.84
Cdk5rap1Q8BTW8 Gm40881-201ENSMUST00000223397 166 ntBASIC20.28■□□□□ 0.84
Cdk5rap1Q8BTW8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdk5rap1Q8BTW8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdk5rap1Q8BTW8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdk5rap1Q8BTW8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdk5rap1Q8BTW8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdk5rap1Q8BTW8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdk5rap1Q8BTW8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms