Protein–RNA interactions for Protein: Q86UA6

RPAIN, RPA-interacting protein, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAINQ86UA6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPAINQ86UA6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.37■■□□□ 1.81
RPAINQ86UA6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.36■■□□□ 1.81
RPAINQ86UA6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.36■■□□□ 1.81
RPAINQ86UA6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RPAINQ86UA6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
RPAINQ86UA6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.36■■□□□ 1.81
RPAINQ86UA6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.36■■□□□ 1.81
RPAINQ86UA6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.36■■□□□ 1.81
RPAINQ86UA6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
RPAINQ86UA6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
RPAINQ86UA6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RPAINQ86UA6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPAINQ86UA6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RPAINQ86UA6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
RPAINQ86UA6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.35■■□□□ 1.81
RPAINQ86UA6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPAINQ86UA6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.35■■□□□ 1.81
RPAINQ86UA6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RPAINQ86UA6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
RPAINQ86UA6 AC021242.3-201ENST00000607598 1377 ntBASIC26.34■■□□□ 1.81
RPAINQ86UA6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
RPAINQ86UA6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
RPAINQ86UA6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RPAINQ86UA6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPAINQ86UA6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPAINQ86UA6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPAINQ86UA6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.33■■□□□ 1.81
RPAINQ86UA6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPAINQ86UA6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RPAINQ86UA6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RPAINQ86UA6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPAINQ86UA6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.32■■□□□ 1.8
RPAINQ86UA6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPAINQ86UA6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.31■■□□□ 1.8
RPAINQ86UA6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPAINQ86UA6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPAINQ86UA6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.31■■□□□ 1.8
RPAINQ86UA6 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.31■■□□□ 1.8
RPAINQ86UA6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.31■■□□□ 1.8
RPAINQ86UA6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.31■■□□□ 1.8
RPAINQ86UA6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
RPAINQ86UA6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
RPAINQ86UA6 UNC93B8-201ENST00000511903 705 ntBASIC26.3■■□□□ 1.8
RPAINQ86UA6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPAINQ86UA6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RPAINQ86UA6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
RPAINQ86UA6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPAINQ86UA6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RPAINQ86UA6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RPAINQ86UA6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.29■■□□□ 1.8
RPAINQ86UA6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.29■■□□□ 1.8
RPAINQ86UA6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPAINQ86UA6 MIR935-201ENST00000401179 91 ntBASIC26.28■■□□□ 1.8
RPAINQ86UA6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPAINQ86UA6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.28■■□□□ 1.8
RPAINQ86UA6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.28■■□□□ 1.8
RPAINQ86UA6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
RPAINQ86UA6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.27■■□□□ 1.8
RPAINQ86UA6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.27■■□□□ 1.8
RPAINQ86UA6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.27■■□□□ 1.8
RPAINQ86UA6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPAINQ86UA6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
RPAINQ86UA6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.26■■□□□ 1.79
RPAINQ86UA6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RPAINQ86UA6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
RPAINQ86UA6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.26■■□□□ 1.79
RPAINQ86UA6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.26■■□□□ 1.79
RPAINQ86UA6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.26■■□□□ 1.79
RPAINQ86UA6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RPAINQ86UA6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.25■■□□□ 1.79
RPAINQ86UA6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.25■■□□□ 1.79
RPAINQ86UA6 MIR4281-201ENST00000580852 62 ntBASIC26.25■■□□□ 1.79
RPAINQ86UA6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RPAINQ86UA6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RPAINQ86UA6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.24■■□□□ 1.79
RPAINQ86UA6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RPAINQ86UA6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.24■■□□□ 1.79
RPAINQ86UA6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.24■■□□□ 1.79
RPAINQ86UA6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RPAINQ86UA6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RPAINQ86UA6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RPAINQ86UA6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RPAINQ86UA6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.23■■□□□ 1.79
RPAINQ86UA6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.23■■□□□ 1.79
RPAINQ86UA6 AC011551.1-201ENST00000614101 683 ntBASIC26.23■■□□□ 1.79
RPAINQ86UA6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RPAINQ86UA6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
RPAINQ86UA6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RPAINQ86UA6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RPAINQ86UA6 KRT16P3-201ENST00000439127 1283 ntBASIC26.22■■□□□ 1.79
RPAINQ86UA6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
RPAINQ86UA6 AC092028.1-203ENST00000608262 953 ntBASIC26.22■■□□□ 1.79
RPAINQ86UA6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RPAINQ86UA6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RPAINQ86UA6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.21■■□□□ 1.79
RPAINQ86UA6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RPAINQ86UA6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RPAINQ86UA6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RPAINQ86UA6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms