Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.38■□□□□ 0.53
Ttc28Q80XJ3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ttc28Q80XJ3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ttc28Q80XJ3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ttc28Q80XJ3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ttc28Q80XJ3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ttc28Q80XJ3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ttc28Q80XJ3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ttc28Q80XJ3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ttc28Q80XJ3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ttc28Q80XJ3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
Ttc28Q80XJ3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.37■□□□□ 0.53
Ttc28Q80XJ3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc28Q80XJ3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc28Q80XJ3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc28Q80XJ3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.36■□□□□ 0.53
Ttc28Q80XJ3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.35■□□□□ 0.53
Ttc28Q80XJ3 Gm8495-201ENSMUST00000188740 694 ntBASIC18.35■□□□□ 0.53
Ttc28Q80XJ3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.35■□□□□ 0.53
Ttc28Q80XJ3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc28Q80XJ3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ttc28Q80XJ3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc28Q80XJ3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc28Q80XJ3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ttc28Q80XJ3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ttc28Q80XJ3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ttc28Q80XJ3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc28Q80XJ3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.34■□□□□ 0.53
Ttc28Q80XJ3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Ttc28Q80XJ3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc28Q80XJ3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.34■□□□□ 0.53
Ttc28Q80XJ3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.34■□□□□ 0.53
Ttc28Q80XJ3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ttc28Q80XJ3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Ttc28Q80XJ3 Gm18284-201ENSMUST00000172604 624 ntBASIC18.33■□□□□ 0.53
Ttc28Q80XJ3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ttc28Q80XJ3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ttc28Q80XJ3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc28Q80XJ3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc28Q80XJ3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc28Q80XJ3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.32■□□□□ 0.52
Ttc28Q80XJ3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc28Q80XJ3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc28Q80XJ3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.32■□□□□ 0.52
Ttc28Q80XJ3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc28Q80XJ3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ttc28Q80XJ3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Ttc28Q80XJ3 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.31■□□□□ 0.52
Ttc28Q80XJ3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc28Q80XJ3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.31■□□□□ 0.52
Ttc28Q80XJ3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.31■□□□□ 0.52
Ttc28Q80XJ3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc28Q80XJ3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc28Q80XJ3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc28Q80XJ3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ttc28Q80XJ3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc28Q80XJ3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc28Q80XJ3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc28Q80XJ3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc28Q80XJ3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc28Q80XJ3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ttc28Q80XJ3 Gm6139-201ENSMUST00000079261 882 ntBASIC18.3■□□□□ 0.52
Ttc28Q80XJ3 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.29■□□□□ 0.52
Ttc28Q80XJ3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc28Q80XJ3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc28Q80XJ3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc28Q80XJ3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.29■□□□□ 0.52
Ttc28Q80XJ3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ttc28Q80XJ3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc28Q80XJ3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.28■□□□□ 0.52
Ttc28Q80XJ3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ttc28Q80XJ3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc28Q80XJ3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc28Q80XJ3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc28Q80XJ3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ttc28Q80XJ3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.28■□□□□ 0.52
Ttc28Q80XJ3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ttc28Q80XJ3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ttc28Q80XJ3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc28Q80XJ3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.27■□□□□ 0.52
Ttc28Q80XJ3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ttc28Q80XJ3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc28Q80XJ3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc28Q80XJ3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc28Q80XJ3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ttc28Q80XJ3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
Ttc28Q80XJ3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ttc28Q80XJ3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.27■□□□□ 0.51
Ttc28Q80XJ3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.27■□□□□ 0.51
Ttc28Q80XJ3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Ttc28Q80XJ3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc28Q80XJ3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ttc28Q80XJ3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc28Q80XJ3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ttc28Q80XJ3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.26■□□□□ 0.51
Ttc28Q80XJ3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ttc28Q80XJ3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc28Q80XJ3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc28Q80XJ3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ttc28Q80XJ3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms