Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csmd3Q80T79 Gm10849-201ENSMUST00000100397 618 ntBASIC15.08■□□□□ 0.01
Csmd3Q80T79 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Csmd3Q80T79 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.08■□□□□ 0.01
Csmd3Q80T79 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Csmd3Q80T79 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.08■□□□□ 0
Csmd3Q80T79 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.07■□□□□ 0
Csmd3Q80T79 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Csmd3Q80T79 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Csmd3Q80T79 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Csmd3Q80T79 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Csmd3Q80T79 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Csmd3Q80T79 Gm10399-202ENSMUST00000202768 748 ntBASIC15.07■□□□□ 0
Csmd3Q80T79 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Csmd3Q80T79 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.07■□□□□ 0
Csmd3Q80T79 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Csmd3Q80T79 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.06■□□□□ 0
Csmd3Q80T79 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Csmd3Q80T79 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.06■□□□□ 0
Csmd3Q80T79 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.06■□□□□ 0
Csmd3Q80T79 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csmd3Q80T79 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csmd3Q80T79 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csmd3Q80T79 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Csmd3Q80T79 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.05■□□□□ 0
Csmd3Q80T79 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
Csmd3Q80T79 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ 0
Csmd3Q80T79 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.05■□□□□ 0
Csmd3Q80T79 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Csmd3Q80T79 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.05■□□□□ -0
Csmd3Q80T79 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.05■□□□□ -0
Csmd3Q80T79 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Csmd3Q80T79 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Csmd3Q80T79 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.05■□□□□ -0
Csmd3Q80T79 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.05■□□□□ -0
Csmd3Q80T79 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Csmd3Q80T79 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Csmd3Q80T79 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.05■□□□□ -0
Csmd3Q80T79 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Csmd3Q80T79 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Csmd3Q80T79 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Csmd3Q80T79 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Csmd3Q80T79 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Csmd3Q80T79 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC15.04■□□□□ -0
Csmd3Q80T79 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Csmd3Q80T79 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Csmd3Q80T79 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Csmd3Q80T79 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Csmd3Q80T79 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.03■□□□□ -0
Csmd3Q80T79 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.03■□□□□ -0
Csmd3Q80T79 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Csmd3Q80T79 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.03■□□□□ -0
Csmd3Q80T79 Fezf2-202ENSMUST00000224023 1917 ntBASIC15.03■□□□□ -0
Csmd3Q80T79 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.03■□□□□ -0
Csmd3Q80T79 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Csmd3Q80T79 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.03■□□□□ -0
Csmd3Q80T79 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Csmd3Q80T79 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.03■□□□□ -0
Csmd3Q80T79 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Csmd3Q80T79 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Csmd3Q80T79 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.02■□□□□ -0
Csmd3Q80T79 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Csmd3Q80T79 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Csmd3Q80T79 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Csmd3Q80T79 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Csmd3Q80T79 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Csmd3Q80T79 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Csmd3Q80T79 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Csmd3Q80T79 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Csmd3Q80T79 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.01□□□□□ -0.01
Csmd3Q80T79 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.01□□□□□ -0.01
Csmd3Q80T79 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Csmd3Q80T79 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Csmd3Q80T79 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.01□□□□□ -0.01
Csmd3Q80T79 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Csmd3Q80T79 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Csmd3Q80T79 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Csmd3Q80T79 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Csmd3Q80T79 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Csmd3Q80T79 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15□□□□□ -0.01
Csmd3Q80T79 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Csmd3Q80T79 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Csmd3Q80T79 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15□□□□□ -0.01
Csmd3Q80T79 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Csmd3Q80T79 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Csmd3Q80T79 AC153890.1-201ENSMUST00000220021 2469 ntBASIC14.99□□□□□ -0.01
Csmd3Q80T79 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Csmd3Q80T79 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Csmd3Q80T79 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.99□□□□□ -0.01
Csmd3Q80T79 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Csmd3Q80T79 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.99□□□□□ -0.01
Csmd3Q80T79 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.99□□□□□ -0.01
Csmd3Q80T79 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Csmd3Q80T79 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Csmd3Q80T79 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Csmd3Q80T79 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Csmd3Q80T79 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Csmd3Q80T79 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.98□□□□□ -0.01
Csmd3Q80T79 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Csmd3Q80T79 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms