Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAI1Q7Z5J4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAI1Q7Z5J4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RAI1Q7Z5J4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAI1Q7Z5J4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAI1Q7Z5J4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAI1Q7Z5J4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAI1Q7Z5J4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAI1Q7Z5J4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.49■□□□□ 0.87
RAI1Q7Z5J4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.49■□□□□ 0.87
RAI1Q7Z5J4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAI1Q7Z5J4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAI1Q7Z5J4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAI1Q7Z5J4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAI1Q7Z5J4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.49■□□□□ 0.87
RAI1Q7Z5J4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAI1Q7Z5J4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAI1Q7Z5J4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAI1Q7Z5J4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAI1Q7Z5J4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAI1Q7Z5J4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAI1Q7Z5J4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAI1Q7Z5J4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.48■□□□□ 0.87
RAI1Q7Z5J4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
RAI1Q7Z5J4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
RAI1Q7Z5J4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RAI1Q7Z5J4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RAI1Q7Z5J4 AC021242.3-201ENST00000607598 1377 ntBASIC20.47■□□□□ 0.87
RAI1Q7Z5J4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.47■□□□□ 0.87
RAI1Q7Z5J4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAI1Q7Z5J4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAI1Q7Z5J4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.47■□□□□ 0.87
RAI1Q7Z5J4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.47■□□□□ 0.87
RAI1Q7Z5J4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.47■□□□□ 0.87
RAI1Q7Z5J4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
RAI1Q7Z5J4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAI1Q7Z5J4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.46■□□□□ 0.87
RAI1Q7Z5J4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.46■□□□□ 0.87
RAI1Q7Z5J4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
RAI1Q7Z5J4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAI1Q7Z5J4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RAI1Q7Z5J4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAI1Q7Z5J4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAI1Q7Z5J4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAI1Q7Z5J4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.45■□□□□ 0.86
RAI1Q7Z5J4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAI1Q7Z5J4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RAI1Q7Z5J4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAI1Q7Z5J4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAI1Q7Z5J4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.45■□□□□ 0.86
RAI1Q7Z5J4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RAI1Q7Z5J4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RAI1Q7Z5J4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RAI1Q7Z5J4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.44■□□□□ 0.86
RAI1Q7Z5J4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.44■□□□□ 0.86
RAI1Q7Z5J4 AC120024.1-201ENST00000562672 995 ntBASIC20.44■□□□□ 0.86
RAI1Q7Z5J4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.44■□□□□ 0.86
RAI1Q7Z5J4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.43■□□□□ 0.86
RAI1Q7Z5J4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAI1Q7Z5J4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAI1Q7Z5J4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAI1Q7Z5J4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAI1Q7Z5J4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAI1Q7Z5J4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAI1Q7Z5J4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.42■□□□□ 0.86
RAI1Q7Z5J4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RAI1Q7Z5J4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAI1Q7Z5J4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.41■□□□□ 0.86
RAI1Q7Z5J4 AC008406.3-201ENST00000620001 1374 ntBASIC20.41■□□□□ 0.86
RAI1Q7Z5J4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAI1Q7Z5J4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAI1Q7Z5J4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAI1Q7Z5J4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.41■□□□□ 0.86
RAI1Q7Z5J4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAI1Q7Z5J4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAI1Q7Z5J4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAI1Q7Z5J4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAI1Q7Z5J4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAI1Q7Z5J4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RAI1Q7Z5J4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.4■□□□□ 0.86
RAI1Q7Z5J4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAI1Q7Z5J4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.4■□□□□ 0.86
RAI1Q7Z5J4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAI1Q7Z5J4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.39■□□□□ 0.86
RAI1Q7Z5J4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAI1Q7Z5J4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.39■□□□□ 0.86
RAI1Q7Z5J4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
RAI1Q7Z5J4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RAI1Q7Z5J4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAI1Q7Z5J4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.39■□□□□ 0.85
RAI1Q7Z5J4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.39■□□□□ 0.85
RAI1Q7Z5J4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.39■□□□□ 0.85
RAI1Q7Z5J4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.38■□□□□ 0.85
RAI1Q7Z5J4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.38■□□□□ 0.85
RAI1Q7Z5J4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RAI1Q7Z5J4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.38■□□□□ 0.85
RAI1Q7Z5J4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.38■□□□□ 0.85
RAI1Q7Z5J4 AC011551.1-201ENST00000614101 683 ntBASIC20.38■□□□□ 0.85
RAI1Q7Z5J4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAI1Q7Z5J4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms