Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC38.99■■■■□ 3.83
Rtl1Q7M732 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC38.99■■■■□ 3.83
Rtl1Q7M732 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC38.99■■■■□ 3.83
Rtl1Q7M732 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC38.98■■■■□ 3.83
Rtl1Q7M732 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC38.98■■■■□ 3.83
Rtl1Q7M732 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
Rtl1Q7M732 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC38.97■■■■□ 3.83
Rtl1Q7M732 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC38.97■■■■□ 3.83
Rtl1Q7M732 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
Rtl1Q7M732 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
Rtl1Q7M732 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC38.97■■■■□ 3.83
Rtl1Q7M732 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC38.97■■■■□ 3.83
Rtl1Q7M732 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC38.96■■■■□ 3.83
Rtl1Q7M732 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
Rtl1Q7M732 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC38.96■■■■□ 3.83
Rtl1Q7M732 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
Rtl1Q7M732 Gm9959-201ENSMUST00000068277 390 ntBASIC38.95■■■■□ 3.83
Rtl1Q7M732 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
Rtl1Q7M732 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC38.95■■■■□ 3.83
Rtl1Q7M732 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC38.94■■■■□ 3.82
Rtl1Q7M732 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC38.94■■■■□ 3.82
Rtl1Q7M732 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC38.94■■■■□ 3.82
Rtl1Q7M732 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
Rtl1Q7M732 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
Rtl1Q7M732 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC38.94■■■■□ 3.82
Rtl1Q7M732 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC38.94■■■■□ 3.82
Rtl1Q7M732 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC38.94■■■■□ 3.82
Rtl1Q7M732 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC38.94■■■■□ 3.82
Rtl1Q7M732 Gm11847-201ENSMUST00000125165 1119 ntBASIC38.94■■■■□ 3.82
Rtl1Q7M732 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC38.94■■■■□ 3.82
Rtl1Q7M732 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
Rtl1Q7M732 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
Rtl1Q7M732 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC38.93■■■■□ 3.82
Rtl1Q7M732 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC38.93■■■■□ 3.82
Rtl1Q7M732 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC38.93■■■■□ 3.82
Rtl1Q7M732 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
Rtl1Q7M732 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC38.92■■■■□ 3.82
Rtl1Q7M732 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
Rtl1Q7M732 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
Rtl1Q7M732 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
Rtl1Q7M732 Gm42501-201ENSMUST00000200220 1026 ntBASIC38.9■■■■□ 3.82
Rtl1Q7M732 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
Rtl1Q7M732 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC38.89■■■■□ 3.82
Rtl1Q7M732 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
Rtl1Q7M732 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC38.89■■■■□ 3.82
Rtl1Q7M732 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.82
Rtl1Q7M732 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.82
Rtl1Q7M732 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC38.88■■■■□ 3.82
Rtl1Q7M732 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.82
Rtl1Q7M732 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC38.88■■■■□ 3.81
Rtl1Q7M732 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC38.88■■■■□ 3.81
Rtl1Q7M732 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC38.88■■■■□ 3.81
Rtl1Q7M732 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
Rtl1Q7M732 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Rtl1Q7M732 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Rtl1Q7M732 Gm45102-201ENSMUST00000207427 857 ntBASIC38.86■■■■□ 3.81
Rtl1Q7M732 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC38.86■■■■□ 3.81
Rtl1Q7M732 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Rtl1Q7M732 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC38.85■■■■□ 3.81
Rtl1Q7M732 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC38.85■■■■□ 3.81
Rtl1Q7M732 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC38.84■■■■□ 3.81
Rtl1Q7M732 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
Rtl1Q7M732 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC38.83■■■■□ 3.81
Rtl1Q7M732 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
Rtl1Q7M732 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC38.83■■■■□ 3.81
Rtl1Q7M732 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
Rtl1Q7M732 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
Rtl1Q7M732 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
Rtl1Q7M732 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC38.82■■■■□ 3.81
Rtl1Q7M732 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.81
Rtl1Q7M732 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.81
Rtl1Q7M732 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.8
Rtl1Q7M732 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC38.82■■■■□ 3.8
Rtl1Q7M732 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC38.82■■■■□ 3.8
Rtl1Q7M732 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
Rtl1Q7M732 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC38.81■■■■□ 3.8
Rtl1Q7M732 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
Rtl1Q7M732 Gm8093-201ENSMUST00000128935 1892 ntBASIC38.81■■■■□ 3.8
Rtl1Q7M732 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC38.81■■■■□ 3.8
Rtl1Q7M732 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC38.8■■■■□ 3.8
Rtl1Q7M732 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC38.78■■■■□ 3.8
Rtl1Q7M732 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
Rtl1Q7M732 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
Rtl1Q7M732 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
Rtl1Q7M732 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC38.77■■■■□ 3.8
Rtl1Q7M732 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC38.77■■■■□ 3.8
Rtl1Q7M732 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC38.77■■■■□ 3.8
Rtl1Q7M732 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
Rtl1Q7M732 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
Rtl1Q7M732 AC153962.1-201ENSMUST00000218530 1948 ntBASIC38.76■■■■□ 3.8
Rtl1Q7M732 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.79
Rtl1Q7M732 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.79
Rtl1Q7M732 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
Rtl1Q7M732 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
Rtl1Q7M732 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC38.74■■■■□ 3.79
Rtl1Q7M732 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC38.74■■■■□ 3.79
Rtl1Q7M732 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC38.74■■■■□ 3.79
Rtl1Q7M732 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC38.74■■■■□ 3.79
Rtl1Q7M732 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC38.74■■■■□ 3.79
Rtl1Q7M732 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC38.73■■■■□ 3.79
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms