Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NHLRC1Q6VVB1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.27■■□□□ 1
NHLRC1Q6VVB1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NHLRC1Q6VVB1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
NHLRC1Q6VVB1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.27■■□□□ 1
NHLRC1Q6VVB1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NHLRC1Q6VVB1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.27■■□□□ 1
NHLRC1Q6VVB1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.27■■□□□ 1
NHLRC1Q6VVB1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.27■■□□□ 1
NHLRC1Q6VVB1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NHLRC1Q6VVB1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NHLRC1Q6VVB1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.26■□□□□ 0.99
NHLRC1Q6VVB1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NHLRC1Q6VVB1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NHLRC1Q6VVB1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NHLRC1Q6VVB1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
NHLRC1Q6VVB1 SPCS2P3-201ENST00000500401 656 ntBASIC21.26■□□□□ 0.99
NHLRC1Q6VVB1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NHLRC1Q6VVB1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.26■□□□□ 0.99
NHLRC1Q6VVB1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NHLRC1Q6VVB1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NHLRC1Q6VVB1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NHLRC1Q6VVB1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.25■□□□□ 0.99
NHLRC1Q6VVB1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NHLRC1Q6VVB1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
NHLRC1Q6VVB1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NHLRC1Q6VVB1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
NHLRC1Q6VVB1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
NHLRC1Q6VVB1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.24■□□□□ 0.99
NHLRC1Q6VVB1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NHLRC1Q6VVB1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NHLRC1Q6VVB1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
NHLRC1Q6VVB1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NHLRC1Q6VVB1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NHLRC1Q6VVB1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
NHLRC1Q6VVB1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NHLRC1Q6VVB1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NHLRC1Q6VVB1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.23■□□□□ 0.99
NHLRC1Q6VVB1 SLC6A10P-202ENST00000431994 2058 ntBASIC21.23■□□□□ 0.99
NHLRC1Q6VVB1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
NHLRC1Q6VVB1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.22■□□□□ 0.99
NHLRC1Q6VVB1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NHLRC1Q6VVB1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NHLRC1Q6VVB1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NHLRC1Q6VVB1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.22■□□□□ 0.99
NHLRC1Q6VVB1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NHLRC1Q6VVB1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.22■□□□□ 0.99
NHLRC1Q6VVB1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
NHLRC1Q6VVB1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NHLRC1Q6VVB1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NHLRC1Q6VVB1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NHLRC1Q6VVB1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NHLRC1Q6VVB1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.21■□□□□ 0.99
NHLRC1Q6VVB1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NHLRC1Q6VVB1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.21■□□□□ 0.99
NHLRC1Q6VVB1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NHLRC1Q6VVB1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NHLRC1Q6VVB1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NHLRC1Q6VVB1 KRT18P60-201ENST00000312876 1297 ntBASIC21.2■□□□□ 0.98
NHLRC1Q6VVB1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NHLRC1Q6VVB1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NHLRC1Q6VVB1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NHLRC1Q6VVB1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NHLRC1Q6VVB1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NHLRC1Q6VVB1 AC022211.4-201ENST00000625094 2161 ntBASIC21.19■□□□□ 0.98
NHLRC1Q6VVB1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NHLRC1Q6VVB1 ABHD17AP5-201ENST00000580133 923 ntBASIC21.19■□□□□ 0.98
NHLRC1Q6VVB1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NHLRC1Q6VVB1 KRT18P10-201ENST00000388836 1287 ntBASIC21.18■□□□□ 0.98
NHLRC1Q6VVB1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NHLRC1Q6VVB1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
NHLRC1Q6VVB1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NHLRC1Q6VVB1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NHLRC1Q6VVB1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NHLRC1Q6VVB1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.17■□□□□ 0.98
NHLRC1Q6VVB1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NHLRC1Q6VVB1 AC129492.7-201ENST00000622992 756 ntBASIC21.17■□□□□ 0.98
NHLRC1Q6VVB1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NHLRC1Q6VVB1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NHLRC1Q6VVB1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
NHLRC1Q6VVB1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NHLRC1Q6VVB1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NHLRC1Q6VVB1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NHLRC1Q6VVB1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NHLRC1Q6VVB1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NHLRC1Q6VVB1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NHLRC1Q6VVB1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NHLRC1Q6VVB1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NHLRC1Q6VVB1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NHLRC1Q6VVB1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NHLRC1Q6VVB1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NHLRC1Q6VVB1 DUX4L9-201ENST00000449051 1259 ntBASIC21.16■□□□□ 0.98
NHLRC1Q6VVB1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.16■□□□□ 0.98
NHLRC1Q6VVB1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.16■□□□□ 0.98
NHLRC1Q6VVB1 AC142381.3-201ENST00000568208 1670 ntBASIC21.15■□□□□ 0.98
NHLRC1Q6VVB1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.15■□□□□ 0.98
NHLRC1Q6VVB1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NHLRC1Q6VVB1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NHLRC1Q6VVB1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NHLRC1Q6VVB1 NTF6A-201ENST00000591175 560 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms