Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col11a1Q61245 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Col11a1Q61245 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col11a1Q61245 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col11a1Q61245 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Col11a1Q61245 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC24.84■■□□□ 1.57
Col11a1Q61245 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col11a1Q61245 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.83■■□□□ 1.57
Col11a1Q61245 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC24.82■■□□□ 1.56
Col11a1Q61245 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Col11a1Q61245 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Col11a1Q61245 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Col11a1Q61245 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col11a1Q61245 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.81■■□□□ 1.56
Col11a1Q61245 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col11a1Q61245 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col11a1Q61245 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col11a1Q61245 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Col11a1Q61245 Gm2011-201ENSMUST00000203124 1263 ntBASIC24.8■■□□□ 1.56
Col11a1Q61245 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col11a1Q61245 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col11a1Q61245 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col11a1Q61245 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col11a1Q61245 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col11a1Q61245 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Col11a1Q61245 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.79■■□□□ 1.56
Col11a1Q61245 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Col11a1Q61245 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC24.79■■□□□ 1.56
Col11a1Q61245 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Col11a1Q61245 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
Col11a1Q61245 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col11a1Q61245 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Col11a1Q61245 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.79■■□□□ 1.56
Col11a1Q61245 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col11a1Q61245 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col11a1Q61245 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Col11a1Q61245 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col11a1Q61245 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Col11a1Q61245 Gm10620-201ENSMUST00000098379 1332 ntBASIC24.77■■□□□ 1.56
Col11a1Q61245 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col11a1Q61245 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col11a1Q61245 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC24.77■■□□□ 1.56
Col11a1Q61245 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col11a1Q61245 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col11a1Q61245 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Col11a1Q61245 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Col11a1Q61245 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Col11a1Q61245 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Col11a1Q61245 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Col11a1Q61245 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Col11a1Q61245 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col11a1Q61245 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col11a1Q61245 Gm8495-201ENSMUST00000188740 694 ntBASIC24.75■■□□□ 1.55
Col11a1Q61245 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC24.75■■□□□ 1.55
Col11a1Q61245 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC24.74■■□□□ 1.55
Col11a1Q61245 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col11a1Q61245 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col11a1Q61245 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Col11a1Q61245 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC24.74■■□□□ 1.55
Col11a1Q61245 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col11a1Q61245 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col11a1Q61245 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.73■■□□□ 1.55
Col11a1Q61245 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC24.73■■□□□ 1.55
Col11a1Q61245 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col11a1Q61245 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col11a1Q61245 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Col11a1Q61245 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Col11a1Q61245 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col11a1Q61245 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC24.72■■□□□ 1.55
Col11a1Q61245 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Col11a1Q61245 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col11a1Q61245 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col11a1Q61245 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC24.72■■□□□ 1.55
Col11a1Q61245 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col11a1Q61245 Gm29257-201ENSMUST00000186115 639 ntBASIC24.72■■□□□ 1.55
Col11a1Q61245 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Col11a1Q61245 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col11a1Q61245 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.71■■□□□ 1.55
Col11a1Q61245 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col11a1Q61245 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col11a1Q61245 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Col11a1Q61245 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.55
Col11a1Q61245 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Col11a1Q61245 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.7■■□□□ 1.54
Col11a1Q61245 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Col11a1Q61245 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
Col11a1Q61245 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Col11a1Q61245 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC24.7■■□□□ 1.54
Col11a1Q61245 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Col11a1Q61245 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col11a1Q61245 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col11a1Q61245 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC24.68■■□□□ 1.54
Col11a1Q61245 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Col11a1Q61245 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.68■■□□□ 1.54
Col11a1Q61245 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC24.68■■□□□ 1.54
Col11a1Q61245 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC24.68■■□□□ 1.54
Col11a1Q61245 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
Col11a1Q61245 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col11a1Q61245 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Col11a1Q61245 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 275.9 ms