Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.8■■□□□ 1.08
PRAMEF20Q5VT98 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF20Q5VT98 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PRAMEF20Q5VT98 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF20Q5VT98 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.79■■□□□ 1.08
PRAMEF20Q5VT98 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF20Q5VT98 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PRAMEF20Q5VT98 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.78■■□□□ 1.08
PRAMEF20Q5VT98 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF20Q5VT98 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF20Q5VT98 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF20Q5VT98 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF20Q5VT98 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF20Q5VT98 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF20Q5VT98 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF20Q5VT98 AL451085.2-201ENST00000605085 799 ntBASIC21.77■■□□□ 1.08
PRAMEF20Q5VT98 AC091060.1-201ENST00000623524 1766 ntBASIC21.76■■□□□ 1.07
PRAMEF20Q5VT98 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF20Q5VT98 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.76■■□□□ 1.07
PRAMEF20Q5VT98 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PRAMEF20Q5VT98 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.76■■□□□ 1.07
PRAMEF20Q5VT98 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 AC103724.3-201ENST00000564481 992 ntBASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF20Q5VT98 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.74■■□□□ 1.07
PRAMEF20Q5VT98 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF20Q5VT98 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.74■■□□□ 1.07
PRAMEF20Q5VT98 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF20Q5VT98 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PRAMEF20Q5VT98 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF20Q5VT98 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF20Q5VT98 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.73■■□□□ 1.07
PRAMEF20Q5VT98 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 AL031848.2-201ENST00000607670 837 ntBASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 AC097639.1-201ENST00000565519 1891 ntBASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEF20Q5VT98 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEF20Q5VT98 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF20Q5VT98 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF20Q5VT98 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEF20Q5VT98 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PRAMEF20Q5VT98 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
PRAMEF20Q5VT98 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF20Q5VT98 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.7■■□□□ 1.06
PRAMEF20Q5VT98 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.7■■□□□ 1.06
PRAMEF20Q5VT98 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.7■■□□□ 1.06
PRAMEF20Q5VT98 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.7■■□□□ 1.06
PRAMEF20Q5VT98 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF20Q5VT98 DUSP8P4-201ENST00000399538 1761 ntBASIC21.69■■□□□ 1.06
PRAMEF20Q5VT98 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PRAMEF20Q5VT98 AC145676.1-201ENST00000514988 2004 ntBASIC21.69■■□□□ 1.06
PRAMEF20Q5VT98 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF20Q5VT98 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF20Q5VT98 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF20Q5VT98 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEF20Q5VT98 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF20Q5VT98 AC022616.5-201ENST00000518796 181 ntBASIC21.68■■□□□ 1.06
PRAMEF20Q5VT98 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEF20Q5VT98 AL035685.1-201ENST00000636663 812 ntBASIC21.68■■□□□ 1.06
PRAMEF20Q5VT98 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF20Q5VT98 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 AL592295.1-201ENST00000400984 884 ntBASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 AC009299.2-201ENST00000482477 511 ntBASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
PRAMEF20Q5VT98 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.66■■□□□ 1.06
PRAMEF20Q5VT98 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF20Q5VT98 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.66■■□□□ 1.06
PRAMEF20Q5VT98 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF20Q5VT98 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.66■■□□□ 1.06
PRAMEF20Q5VT98 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 FOXO3B-201ENST00000395675 1928 ntBASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms