Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
Lin28bQ45KJ6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lin28bQ45KJ6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lin28bQ45KJ6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lin28bQ45KJ6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lin28bQ45KJ6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Lin28bQ45KJ6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lin28bQ45KJ6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lin28bQ45KJ6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lin28bQ45KJ6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lin28bQ45KJ6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lin28bQ45KJ6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.43■□□□□ 0.86
Lin28bQ45KJ6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lin28bQ45KJ6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lin28bQ45KJ6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Lin28bQ45KJ6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.43■□□□□ 0.86
Lin28bQ45KJ6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lin28bQ45KJ6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lin28bQ45KJ6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lin28bQ45KJ6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lin28bQ45KJ6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lin28bQ45KJ6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lin28bQ45KJ6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lin28bQ45KJ6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lin28bQ45KJ6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin28bQ45KJ6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.41■□□□□ 0.86
Lin28bQ45KJ6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Lin28bQ45KJ6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin28bQ45KJ6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.41■□□□□ 0.86
Lin28bQ45KJ6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin28bQ45KJ6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin28bQ45KJ6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lin28bQ45KJ6 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.4■□□□□ 0.86
Lin28bQ45KJ6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin28bQ45KJ6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.4■□□□□ 0.86
Lin28bQ45KJ6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lin28bQ45KJ6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.4■□□□□ 0.86
Lin28bQ45KJ6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Lin28bQ45KJ6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.4■□□□□ 0.86
Lin28bQ45KJ6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Lin28bQ45KJ6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Lin28bQ45KJ6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lin28bQ45KJ6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Lin28bQ45KJ6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.39■□□□□ 0.86
Lin28bQ45KJ6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lin28bQ45KJ6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lin28bQ45KJ6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.39■□□□□ 0.85
Lin28bQ45KJ6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lin28bQ45KJ6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lin28bQ45KJ6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.39■□□□□ 0.85
Lin28bQ45KJ6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lin28bQ45KJ6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lin28bQ45KJ6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lin28bQ45KJ6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lin28bQ45KJ6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lin28bQ45KJ6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.38■□□□□ 0.85
Lin28bQ45KJ6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.38■□□□□ 0.85
Lin28bQ45KJ6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.38■□□□□ 0.85
Lin28bQ45KJ6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.38■□□□□ 0.85
Lin28bQ45KJ6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.38■□□□□ 0.85
Lin28bQ45KJ6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.38■□□□□ 0.85
Lin28bQ45KJ6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lin28bQ45KJ6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lin28bQ45KJ6 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.38■□□□□ 0.85
Lin28bQ45KJ6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lin28bQ45KJ6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lin28bQ45KJ6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lin28bQ45KJ6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lin28bQ45KJ6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.37■□□□□ 0.85
Lin28bQ45KJ6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Lin28bQ45KJ6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lin28bQ45KJ6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lin28bQ45KJ6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.37■□□□□ 0.85
Lin28bQ45KJ6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lin28bQ45KJ6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lin28bQ45KJ6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lin28bQ45KJ6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.36■□□□□ 0.85
Lin28bQ45KJ6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lin28bQ45KJ6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lin28bQ45KJ6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lin28bQ45KJ6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.35■□□□□ 0.85
Lin28bQ45KJ6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.35■□□□□ 0.85
Lin28bQ45KJ6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lin28bQ45KJ6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lin28bQ45KJ6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lin28bQ45KJ6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lin28bQ45KJ6 Gm40881-201ENSMUST00000223397 166 ntBASIC20.34■□□□□ 0.85
Lin28bQ45KJ6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.34■□□□□ 0.85
Lin28bQ45KJ6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lin28bQ45KJ6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lin28bQ45KJ6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lin28bQ45KJ6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lin28bQ45KJ6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lin28bQ45KJ6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lin28bQ45KJ6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Lin28bQ45KJ6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lin28bQ45KJ6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lin28bQ45KJ6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.33■□□□□ 0.84
Lin28bQ45KJ6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lin28bQ45KJ6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms