Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.75■■□□□ 1.07
Cnga4Q3UW12 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.75■■□□□ 1.07
Cnga4Q3UW12 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cnga4Q3UW12 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cnga4Q3UW12 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Cnga4Q3UW12 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.75■■□□□ 1.07
Cnga4Q3UW12 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cnga4Q3UW12 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cnga4Q3UW12 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cnga4Q3UW12 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cnga4Q3UW12 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cnga4Q3UW12 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.74■■□□□ 1.07
Cnga4Q3UW12 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cnga4Q3UW12 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cnga4Q3UW12 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cnga4Q3UW12 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.73■■□□□ 1.07
Cnga4Q3UW12 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cnga4Q3UW12 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Cnga4Q3UW12 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Cnga4Q3UW12 Notumos-201ENSMUST00000151998 2659 ntBASIC21.73■■□□□ 1.07
Cnga4Q3UW12 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cnga4Q3UW12 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cnga4Q3UW12 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cnga4Q3UW12 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cnga4Q3UW12 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cnga4Q3UW12 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cnga4Q3UW12 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cnga4Q3UW12 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cnga4Q3UW12 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cnga4Q3UW12 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Cnga4Q3UW12 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Cnga4Q3UW12 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.7■■□□□ 1.06
Cnga4Q3UW12 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cnga4Q3UW12 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.7■■□□□ 1.06
Cnga4Q3UW12 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.7■■□□□ 1.06
Cnga4Q3UW12 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.7■■□□□ 1.06
Cnga4Q3UW12 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cnga4Q3UW12 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cnga4Q3UW12 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cnga4Q3UW12 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cnga4Q3UW12 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cnga4Q3UW12 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cnga4Q3UW12 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cnga4Q3UW12 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Cnga4Q3UW12 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.69■■□□□ 1.06
Cnga4Q3UW12 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cnga4Q3UW12 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cnga4Q3UW12 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cnga4Q3UW12 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cnga4Q3UW12 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cnga4Q3UW12 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cnga4Q3UW12 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.67■■□□□ 1.06
Cnga4Q3UW12 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.67■■□□□ 1.06
Cnga4Q3UW12 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cnga4Q3UW12 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.67■■□□□ 1.06
Cnga4Q3UW12 Terc-201ENSMUST00000082862 423 ntBASIC21.67■■□□□ 1.06
Cnga4Q3UW12 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cnga4Q3UW12 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cnga4Q3UW12 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cnga4Q3UW12 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cnga4Q3UW12 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Cnga4Q3UW12 Gm6821-201ENSMUST00000107540 542 ntBASIC21.66■■□□□ 1.06
Cnga4Q3UW12 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.66■■□□□ 1.06
Cnga4Q3UW12 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
Cnga4Q3UW12 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cnga4Q3UW12 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cnga4Q3UW12 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cnga4Q3UW12 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cnga4Q3UW12 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cnga4Q3UW12 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cnga4Q3UW12 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.65■■□□□ 1.06
Cnga4Q3UW12 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cnga4Q3UW12 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cnga4Q3UW12 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.64■■□□□ 1.06
Cnga4Q3UW12 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Cnga4Q3UW12 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cnga4Q3UW12 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cnga4Q3UW12 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Cnga4Q3UW12 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cnga4Q3UW12 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Cnga4Q3UW12 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.63■■□□□ 1.05
Cnga4Q3UW12 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cnga4Q3UW12 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.63■■□□□ 1.05
Cnga4Q3UW12 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cnga4Q3UW12 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cnga4Q3UW12 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cnga4Q3UW12 Mir3960-201ENSMUST00000198213 73 ntBASIC21.62■■□□□ 1.05
Cnga4Q3UW12 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cnga4Q3UW12 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cnga4Q3UW12 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.61■■□□□ 1.05
Cnga4Q3UW12 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cnga4Q3UW12 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Cnga4Q3UW12 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cnga4Q3UW12 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Cnga4Q3UW12 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cnga4Q3UW12 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Cnga4Q3UW12 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cnga4Q3UW12 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cnga4Q3UW12 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cnga4Q3UW12 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms