Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SgcdP82347 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SgcdP82347 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SgcdP82347 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SgcdP82347 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SgcdP82347 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SgcdP82347 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SgcdP82347 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SgcdP82347 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
SgcdP82347 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SgcdP82347 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcdP82347 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcdP82347 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcdP82347 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcdP82347 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcdP82347 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcdP82347 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcdP82347 Scarna2-201ENSMUST00000157560 414 ntBASIC19.63■□□□□ 0.73
SgcdP82347 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcdP82347 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcdP82347 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcdP82347 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SgcdP82347 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SgcdP82347 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SgcdP82347 Gm11687-201ENSMUST00000118911 886 ntBASIC19.62■□□□□ 0.73
SgcdP82347 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SgcdP82347 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SgcdP82347 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.62■□□□□ 0.73
SgcdP82347 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SgcdP82347 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
SgcdP82347 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SgcdP82347 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SgcdP82347 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SgcdP82347 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SgcdP82347 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SgcdP82347 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SgcdP82347 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SgcdP82347 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SgcdP82347 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SgcdP82347 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SgcdP82347 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SgcdP82347 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SgcdP82347 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SgcdP82347 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SgcdP82347 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SgcdP82347 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SgcdP82347 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SgcdP82347 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
SgcdP82347 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SgcdP82347 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SgcdP82347 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SgcdP82347 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SgcdP82347 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SgcdP82347 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SgcdP82347 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SgcdP82347 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SgcdP82347 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SgcdP82347 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SgcdP82347 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.58■□□□□ 0.72
SgcdP82347 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SgcdP82347 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SgcdP82347 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SgcdP82347 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.57■□□□□ 0.72
SgcdP82347 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SgcdP82347 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SgcdP82347 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SgcdP82347 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SgcdP82347 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SgcdP82347 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SgcdP82347 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SgcdP82347 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SgcdP82347 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SgcdP82347 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.56■□□□□ 0.72
SgcdP82347 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SgcdP82347 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
SgcdP82347 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.56■□□□□ 0.72
SgcdP82347 Gm9806-201ENSMUST00000051080 552 ntBASIC19.56■□□□□ 0.72
SgcdP82347 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SgcdP82347 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.56■□□□□ 0.72
SgcdP82347 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SgcdP82347 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SgcdP82347 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SgcdP82347 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SgcdP82347 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SgcdP82347 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SgcdP82347 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SgcdP82347 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SgcdP82347 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SgcdP82347 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.54■□□□□ 0.72
SgcdP82347 Gm16437-201ENSMUST00000025669 507 ntBASIC19.54■□□□□ 0.72
SgcdP82347 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SgcdP82347 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SgcdP82347 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.54■□□□□ 0.72
SgcdP82347 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SgcdP82347 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SgcdP82347 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SgcdP82347 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SgcdP82347 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SgcdP82347 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SgcdP82347 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms