Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.35■■□□□ 1.01
CLDN18P56856 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN18P56856 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN18P56856 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN18P56856 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.34■■□□□ 1.01
CLDN18P56856 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN18P56856 AL031848.2-201ENST00000607670 837 ntBASIC21.34■■□□□ 1.01
CLDN18P56856 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN18P56856 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN18P56856 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.33■■□□□ 1.01
CLDN18P56856 AL035685.1-201ENST00000636663 812 ntBASIC21.33■■□□□ 1.01
CLDN18P56856 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN18P56856 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.33■■□□□ 1
CLDN18P56856 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.33■■□□□ 1
CLDN18P56856 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN18P56856 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.32■■□□□ 1
CLDN18P56856 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.32■■□□□ 1
CLDN18P56856 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CLDN18P56856 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN18P56856 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN18P56856 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN18P56856 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN18P56856 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.31■■□□□ 1
CLDN18P56856 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.31■■□□□ 1
CLDN18P56856 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CLDN18P56856 AC097639.1-201ENST00000565519 1891 ntBASIC21.31■■□□□ 1
CLDN18P56856 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CLDN18P56856 AL592295.1-201ENST00000400984 884 ntBASIC21.31■■□□□ 1
CLDN18P56856 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.31■■□□□ 1
CLDN18P56856 AC009299.2-201ENST00000482477 511 ntBASIC21.31■■□□□ 1
CLDN18P56856 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN18P56856 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CLDN18P56856 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN18P56856 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN18P56856 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN18P56856 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN18P56856 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN18P56856 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.3■■□□□ 1
CLDN18P56856 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLDN18P56856 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.3■■□□□ 1
CLDN18P56856 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN18P56856 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.3■■□□□ 1
CLDN18P56856 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.29■■□□□ 1
CLDN18P56856 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
CLDN18P56856 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN18P56856 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
CLDN18P56856 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.29■■□□□ 1
CLDN18P56856 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN18P56856 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.29■■□□□ 1
CLDN18P56856 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN18P56856 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.29■■□□□ 1
CLDN18P56856 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.29■■□□□ 1
CLDN18P56856 DUSP8P4-201ENST00000399538 1761 ntBASIC21.28■■□□□ 1
CLDN18P56856 AC091060.1-201ENST00000623524 1766 ntBASIC21.28■■□□□ 1
CLDN18P56856 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN18P56856 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.28■■□□□ 1
CLDN18P56856 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN18P56856 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN18P56856 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.27■■□□□ 1
CLDN18P56856 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CLDN18P56856 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CLDN18P56856 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN18P56856 KRT18P24-201ENST00000344739 1156 ntBASIC21.27■■□□□ 1
CLDN18P56856 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.27■■□□□ 1
CLDN18P56856 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.27■■□□□ 1
CLDN18P56856 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CLDN18P56856 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN18P56856 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.26■□□□□ 0.99
CLDN18P56856 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN18P56856 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.25■□□□□ 0.99
CLDN18P56856 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CLDN18P56856 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN18P56856 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN18P56856 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN18P56856 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN18P56856 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CLDN18P56856 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CLDN18P56856 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.25■□□□□ 0.99
CLDN18P56856 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.25■□□□□ 0.99
CLDN18P56856 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN18P56856 FOXO3B-201ENST00000395675 1928 ntBASIC21.24■□□□□ 0.99
CLDN18P56856 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN18P56856 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN18P56856 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN18P56856 AC120024.1-201ENST00000562672 995 ntBASIC21.24■□□□□ 0.99
CLDN18P56856 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN18P56856 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN18P56856 AC145676.1-201ENST00000514988 2004 ntBASIC21.24■□□□□ 0.99
CLDN18P56856 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CLDN18P56856 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN18P56856 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN18P56856 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN18P56856 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN18P56856 THA1P-201ENST00000590384 1145 ntBASIC21.23■□□□□ 0.99
CLDN18P56856 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.23■□□□□ 0.99
CLDN18P56856 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CLDN18P56856 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.22■□□□□ 0.99
CLDN18P56856 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CLDN18P56856 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN18P56856 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms