Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.29■■□□□ 1
CASP6P55212 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.29■■□□□ 1
CASP6P55212 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.29■■□□□ 1
CASP6P55212 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.29■■□□□ 1
CASP6P55212 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.29■■□□□ 1
CASP6P55212 AC011551.1-201ENST00000614101 683 ntBASIC21.29■■□□□ 1
CASP6P55212 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CASP6P55212 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.28■■□□□ 1
CASP6P55212 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CASP6P55212 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.28■■□□□ 1
CASP6P55212 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CASP6P55212 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CASP6P55212 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.28■■□□□ 1
CASP6P55212 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.28■■□□□ 1
CASP6P55212 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.28■■□□□ 1
CASP6P55212 AL139246.5-201ENST00000606645 996 ntBASIC21.28■■□□□ 1
CASP6P55212 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CASP6P55212 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CASP6P55212 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CASP6P55212 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CASP6P55212 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.27■■□□□ 1
CASP6P55212 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.27■■□□□ 1
CASP6P55212 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.27■■□□□ 1
CASP6P55212 AL356740.2-201ENST00000601559 647 ntBASIC21.27■■□□□ 1
CASP6P55212 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.27■■□□□ 1
CASP6P55212 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CASP6P55212 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CASP6P55212 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CASP6P55212 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CASP6P55212 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
CASP6P55212 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.26■□□□□ 0.99
CASP6P55212 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.26■□□□□ 0.99
CASP6P55212 AL136116.3-201ENST00000402907 1138 ntBASIC21.26■□□□□ 0.99
CASP6P55212 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.26■□□□□ 0.99
CASP6P55212 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.26■□□□□ 0.99
CASP6P55212 MIR6724-1-201ENST00000616420 92 ntBASIC21.26■□□□□ 0.99
CASP6P55212 MIR6724-2-201ENST00000616483 92 ntBASIC21.26■□□□□ 0.99
CASP6P55212 MIR6724-4-201ENST00000617390 92 ntBASIC21.26■□□□□ 0.99
CASP6P55212 MIR6724-3-201ENST00000622482 92 ntBASIC21.26■□□□□ 0.99
CASP6P55212 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CASP6P55212 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CASP6P55212 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.25■□□□□ 0.99
CASP6P55212 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CASP6P55212 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.25■□□□□ 0.99
CASP6P55212 AP004609.3-201ENST00000610705 1884 ntBASIC21.25■□□□□ 0.99
CASP6P55212 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CASP6P55212 MIR638-201ENST00000385237 100 ntBASIC21.24■□□□□ 0.99
CASP6P55212 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.24■□□□□ 0.99
CASP6P55212 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.24■□□□□ 0.99
CASP6P55212 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CASP6P55212 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CASP6P55212 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CASP6P55212 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CASP6P55212 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CASP6P55212 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.23■□□□□ 0.99
CASP6P55212 AC131281.2-201ENST00000520478 145 ntBASIC21.23■□□□□ 0.99
CASP6P55212 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.23■□□□□ 0.99
CASP6P55212 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.23■□□□□ 0.99
CASP6P55212 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CASP6P55212 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.23■□□□□ 0.99
CASP6P55212 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
CASP6P55212 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.22■□□□□ 0.99
CASP6P55212 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CASP6P55212 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.22■□□□□ 0.99
CASP6P55212 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.22■□□□□ 0.99
CASP6P55212 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASP6P55212 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CASP6P55212 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CASP6P55212 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASP6P55212 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASP6P55212 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CASP6P55212 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.21■□□□□ 0.99
CASP6P55212 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CASP6P55212 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.21■□□□□ 0.99
CASP6P55212 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASP6P55212 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CASP6P55212 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.21■□□□□ 0.99
CASP6P55212 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASP6P55212 AL117332.1-201ENST00000622628 974 ntBASIC21.21■□□□□ 0.99
CASP6P55212 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASP6P55212 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CASP6P55212 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CASP6P55212 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASP6P55212 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.21■□□□□ 0.99
CASP6P55212 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASP6P55212 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASP6P55212 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASP6P55212 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.2■□□□□ 0.98
CASP6P55212 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CASP6P55212 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASP6P55212 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CASP6P55212 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.2■□□□□ 0.98
CASP6P55212 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.19■□□□□ 0.98
CASP6P55212 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CASP6P55212 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASP6P55212 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASP6P55212 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.19■□□□□ 0.98
CASP6P55212 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.19■□□□□ 0.98
CASP6P55212 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.19■□□□□ 0.98
CASP6P55212 MIR3621-201ENST00000580529 85 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms