Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC34.63■■■■□ 3.13
CLTCL1P53675 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
CLTCL1P53675 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
CLTCL1P53675 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC34.62■■■■□ 3.13
CLTCL1P53675 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC34.61■■■■□ 3.13
CLTCL1P53675 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC34.61■■■■□ 3.13
CLTCL1P53675 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CLTCL1P53675 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC34.61■■■■□ 3.13
CLTCL1P53675 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
CLTCL1P53675 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC34.61■■■■□ 3.13
CLTCL1P53675 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC34.6■■■■□ 3.13
CLTCL1P53675 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC34.6■■■■□ 3.13
CLTCL1P53675 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
CLTCL1P53675 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC34.59■■■■□ 3.13
CLTCL1P53675 SNAI3-AS1-204ENST00000567997 2048 ntBASIC34.59■■■■□ 3.13
CLTCL1P53675 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC34.59■■■■□ 3.13
CLTCL1P53675 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CLTCL1P53675 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC34.59■■■■□ 3.13
CLTCL1P53675 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CLTCL1P53675 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC34.58■■■■□ 3.13
CLTCL1P53675 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC34.58■■■■□ 3.13
CLTCL1P53675 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC34.58■■■■□ 3.13
CLTCL1P53675 AC131281.2-201ENST00000520478 145 ntBASIC34.58■■■■□ 3.13
CLTCL1P53675 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC34.57■■■■□ 3.12
CLTCL1P53675 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC34.57■■■■□ 3.12
CLTCL1P53675 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
CLTCL1P53675 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
CLTCL1P53675 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC34.56■■■■□ 3.12
CLTCL1P53675 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC34.56■■■■□ 3.12
CLTCL1P53675 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC34.56■■■■□ 3.12
CLTCL1P53675 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC34.55■■■■□ 3.12
CLTCL1P53675 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC34.55■■■■□ 3.12
CLTCL1P53675 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC34.55■■■■□ 3.12
CLTCL1P53675 TSPY9P-201ENST00000440215 945 ntBASIC34.55■■■■□ 3.12
CLTCL1P53675 TSPY11P-201ENST00000442607 1045 ntBASIC34.55■■■■□ 3.12
CLTCL1P53675 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
CLTCL1P53675 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CLTCL1P53675 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CLTCL1P53675 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CLTCL1P53675 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC34.54■■■■□ 3.12
CLTCL1P53675 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC34.53■■■■□ 3.12
CLTCL1P53675 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC34.53■■■■□ 3.12
CLTCL1P53675 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
CLTCL1P53675 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC34.53■■■■□ 3.12
CLTCL1P53675 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
CLTCL1P53675 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CLTCL1P53675 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CLTCL1P53675 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
CLTCL1P53675 AC092028.1-203ENST00000608262 953 ntBASIC34.52■■■■□ 3.12
CLTCL1P53675 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC34.51■■■■□ 3.12
CLTCL1P53675 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
CLTCL1P53675 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC34.5■■■■□ 3.11
CLTCL1P53675 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CLTCL1P53675 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
CLTCL1P53675 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC34.5■■■■□ 3.11
CLTCL1P53675 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC34.5■■■■□ 3.11
CLTCL1P53675 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC34.49■■■■□ 3.11
CLTCL1P53675 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC34.48■■■■□ 3.11
CLTCL1P53675 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CLTCL1P53675 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC34.48■■■■□ 3.11
CLTCL1P53675 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC34.48■■■■□ 3.11
CLTCL1P53675 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC34.46■■■■□ 3.11
CLTCL1P53675 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CLTCL1P53675 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
CLTCL1P53675 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
CLTCL1P53675 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC34.46■■■■□ 3.11
CLTCL1P53675 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC34.46■■■■□ 3.11
CLTCL1P53675 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
CLTCL1P53675 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
CLTCL1P53675 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC34.45■■■■□ 3.1
CLTCL1P53675 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC34.44■■■■□ 3.1
CLTCL1P53675 GAK-223ENST00000628912 497 ntTSL 5 BASIC34.44■■■■□ 3.1
CLTCL1P53675 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CLTCL1P53675 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC34.44■■■■□ 3.1
CLTCL1P53675 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC34.44■■■■□ 3.1
CLTCL1P53675 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC34.44■■■■□ 3.1
CLTCL1P53675 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CLTCL1P53675 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC34.44■■■■□ 3.1
CLTCL1P53675 TRIR-202ENST00000588213 841 ntTSL 3 BASIC34.44■■■■□ 3.1
CLTCL1P53675 AL117332.1-201ENST00000622628 974 ntBASIC34.44■■■■□ 3.1
CLTCL1P53675 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC34.44■■■■□ 3.1
CLTCL1P53675 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC34.44■■■■□ 3.1
CLTCL1P53675 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
CLTCL1P53675 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CLTCL1P53675 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CLTCL1P53675 AC008406.3-201ENST00000620001 1374 ntBASIC34.43■■■■□ 3.1
CLTCL1P53675 AF131216.4-201ENST00000638924 1588 ntBASIC34.43■■■■□ 3.1
CLTCL1P53675 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
CLTCL1P53675 AC096887.2-201ENST00000623443 1957 ntBASIC34.42■■■■□ 3.1
CLTCL1P53675 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC34.42■■■■□ 3.1
CLTCL1P53675 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CLTCL1P53675 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CLTCL1P53675 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
CLTCL1P53675 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC34.41■■■■□ 3.1
CLTCL1P53675 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC34.41■■■■□ 3.1
CLTCL1P53675 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC34.41■■■■□ 3.1
CLTCL1P53675 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC34.41■■■■□ 3.1
CLTCL1P53675 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
CLTCL1P53675 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
CLTCL1P53675 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms