Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sox2P48432 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.08■□□□□ 0.8
Sox2P48432 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox2P48432 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sox2P48432 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox2P48432 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.07■□□□□ 0.8
Sox2P48432 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox2P48432 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox2P48432 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox2P48432 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Sox2P48432 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Sox2P48432 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox2P48432 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox2P48432 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox2P48432 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox2P48432 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Sox2P48432 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Sox2P48432 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.04■□□□□ 0.8
Sox2P48432 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox2P48432 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Sox2P48432 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Sox2P48432 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sox2P48432 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sox2P48432 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox2P48432 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox2P48432 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Sox2P48432 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sox2P48432 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sox2P48432 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.03■□□□□ 0.8
Sox2P48432 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Sox2P48432 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sox2P48432 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sox2P48432 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Sox2P48432 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox2P48432 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sox2P48432 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Sox2P48432 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sox2P48432 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox2P48432 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox2P48432 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox2P48432 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Sox2P48432 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox2P48432 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox2P48432 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox2P48432 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox2P48432 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox2P48432 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sox2P48432 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
Sox2P48432 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox2P48432 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Sox2P48432 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox2P48432 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.01■□□□□ 0.79
Sox2P48432 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox2P48432 Gm42418-201ENSMUST00000182010 1831 ntBASIC20■□□□□ 0.79
Sox2P48432 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Sox2P48432 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20■□□□□ 0.79
Sox2P48432 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20■□□□□ 0.79
Sox2P48432 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Sox2P48432 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sox2P48432 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox2P48432 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.99■□□□□ 0.79
Sox2P48432 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Sox2P48432 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox2P48432 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox2P48432 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox2P48432 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Sox2P48432 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Sox2P48432 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox2P48432 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.98■□□□□ 0.79
Sox2P48432 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox2P48432 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox2P48432 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.98■□□□□ 0.79
Sox2P48432 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox2P48432 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox2P48432 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox2P48432 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox2P48432 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox2P48432 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox2P48432 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox2P48432 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.96■□□□□ 0.79
Sox2P48432 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sox2P48432 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sox2P48432 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox2P48432 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox2P48432 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox2P48432 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox2P48432 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sox2P48432 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox2P48432 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sox2P48432 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox2P48432 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Sox2P48432 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox2P48432 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox2P48432 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.94■□□□□ 0.78
Sox2P48432 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Sox2P48432 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox2P48432 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sox2P48432 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.94■□□□□ 0.78
Sox2P48432 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Sox2P48432 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms