Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TgfaP48030 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TgfaP48030 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TgfaP48030 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TgfaP48030 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TgfaP48030 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
TgfaP48030 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TgfaP48030 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TgfaP48030 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TgfaP48030 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TgfaP48030 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.75■□□□□ 0.59
TgfaP48030 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TgfaP48030 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TgfaP48030 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TgfaP48030 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TgfaP48030 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TgfaP48030 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TgfaP48030 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TgfaP48030 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.74■□□□□ 0.59
TgfaP48030 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
TgfaP48030 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TgfaP48030 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TgfaP48030 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.74■□□□□ 0.59
TgfaP48030 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.74■□□□□ 0.59
TgfaP48030 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TgfaP48030 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TgfaP48030 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TgfaP48030 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TgfaP48030 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.73■□□□□ 0.59
TgfaP48030 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.73■□□□□ 0.59
TgfaP48030 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TgfaP48030 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
TgfaP48030 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TgfaP48030 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.73■□□□□ 0.59
TgfaP48030 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TgfaP48030 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TgfaP48030 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TgfaP48030 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.72■□□□□ 0.59
TgfaP48030 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TgfaP48030 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TgfaP48030 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.72■□□□□ 0.59
TgfaP48030 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TgfaP48030 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TgfaP48030 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TgfaP48030 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TgfaP48030 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.72■□□□□ 0.59
TgfaP48030 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TgfaP48030 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.71■□□□□ 0.59
TgfaP48030 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.71■□□□□ 0.59
TgfaP48030 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TgfaP48030 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TgfaP48030 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TgfaP48030 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TgfaP48030 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TgfaP48030 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TgfaP48030 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TgfaP48030 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TgfaP48030 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TgfaP48030 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TgfaP48030 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TgfaP48030 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TgfaP48030 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.69■□□□□ 0.58
TgfaP48030 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TgfaP48030 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TgfaP48030 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TgfaP48030 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TgfaP48030 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TgfaP48030 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TgfaP48030 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TgfaP48030 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TgfaP48030 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TgfaP48030 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.68■□□□□ 0.58
TgfaP48030 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TgfaP48030 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.67■□□□□ 0.58
TgfaP48030 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TgfaP48030 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TgfaP48030 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.66■□□□□ 0.58
TgfaP48030 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TgfaP48030 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TgfaP48030 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.66■□□□□ 0.58
TgfaP48030 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TgfaP48030 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TgfaP48030 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TgfaP48030 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TgfaP48030 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.65■□□□□ 0.58
TgfaP48030 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TgfaP48030 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TgfaP48030 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TgfaP48030 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.65■□□□□ 0.58
TgfaP48030 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TgfaP48030 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TgfaP48030 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TgfaP48030 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.65■□□□□ 0.58
TgfaP48030 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TgfaP48030 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.65■□□□□ 0.58
TgfaP48030 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TgfaP48030 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.64■□□□□ 0.57
TgfaP48030 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TgfaP48030 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.64■□□□□ 0.57
TgfaP48030 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms