Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps4bP46467 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps4bP46467 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vps4bP46467 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vps4bP46467 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.71■■□□□ 1.07
Vps4bP46467 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vps4bP46467 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps4bP46467 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vps4bP46467 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vps4bP46467 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps4bP46467 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps4bP46467 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps4bP46467 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps4bP46467 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Vps4bP46467 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Vps4bP46467 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps4bP46467 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Vps4bP46467 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps4bP46467 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps4bP46467 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Vps4bP46467 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps4bP46467 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps4bP46467 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps4bP46467 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Vps4bP46467 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps4bP46467 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps4bP46467 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vps4bP46467 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vps4bP46467 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Vps4bP46467 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vps4bP46467 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps4bP46467 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps4bP46467 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.68■■□□□ 1.06
Vps4bP46467 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Vps4bP46467 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps4bP46467 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
Vps4bP46467 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Vps4bP46467 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps4bP46467 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps4bP46467 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps4bP46467 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps4bP46467 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps4bP46467 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps4bP46467 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps4bP46467 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.66■■□□□ 1.06
Vps4bP46467 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vps4bP46467 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.66■■□□□ 1.06
Vps4bP46467 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps4bP46467 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vps4bP46467 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps4bP46467 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps4bP46467 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Vps4bP46467 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps4bP46467 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.65■■□□□ 1.06
Vps4bP46467 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Vps4bP46467 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps4bP46467 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vps4bP46467 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vps4bP46467 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vps4bP46467 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vps4bP46467 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Vps4bP46467 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Vps4bP46467 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps4bP46467 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps4bP46467 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Vps4bP46467 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.63■■□□□ 1.05
Vps4bP46467 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.63■■□□□ 1.05
Vps4bP46467 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps4bP46467 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps4bP46467 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps4bP46467 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps4bP46467 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps4bP46467 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Vps4bP46467 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vps4bP46467 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps4bP46467 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Vps4bP46467 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps4bP46467 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Vps4bP46467 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vps4bP46467 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps4bP46467 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Vps4bP46467 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps4bP46467 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps4bP46467 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps4bP46467 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Vps4bP46467 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vps4bP46467 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vps4bP46467 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps4bP46467 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps4bP46467 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps4bP46467 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps4bP46467 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.59■■□□□ 1.05
Vps4bP46467 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.58■■□□□ 1.05
Vps4bP46467 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.58■■□□□ 1.05
Vps4bP46467 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vps4bP46467 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vps4bP46467 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Vps4bP46467 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Vps4bP46467 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Vps4bP46467 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms