Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.3■□□□□ 0.84
CDKN1AP38936 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.3■□□□□ 0.84
CDKN1AP38936 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.3■□□□□ 0.84
CDKN1AP38936 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKN1AP38936 AC008406.3-201ENST00000620001 1374 ntBASIC20.3■□□□□ 0.84
CDKN1AP38936 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKN1AP38936 KRT16P3-201ENST00000439127 1283 ntBASIC20.29■□□□□ 0.84
CDKN1AP38936 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.29■□□□□ 0.84
CDKN1AP38936 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKN1AP38936 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.29■□□□□ 0.84
CDKN1AP38936 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.28■□□□□ 0.84
CDKN1AP38936 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKN1AP38936 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKN1AP38936 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDKN1AP38936 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.28■□□□□ 0.84
CDKN1AP38936 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.28■□□□□ 0.84
CDKN1AP38936 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.28■□□□□ 0.84
CDKN1AP38936 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.28■□□□□ 0.84
CDKN1AP38936 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKN1AP38936 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.27■□□□□ 0.84
CDKN1AP38936 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.27■□□□□ 0.84
CDKN1AP38936 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDKN1AP38936 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDKN1AP38936 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDKN1AP38936 AC142086.6-201ENST00000621154 1765 ntBASIC20.26■□□□□ 0.83
CDKN1AP38936 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKN1AP38936 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.26■□□□□ 0.83
CDKN1AP38936 AC137630.3-201ENST00000607245 391 ntBASIC20.26■□□□□ 0.83
CDKN1AP38936 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDKN1AP38936 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.25■□□□□ 0.83
CDKN1AP38936 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.25■□□□□ 0.83
CDKN1AP38936 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKN1AP38936 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDKN1AP38936 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.25■□□□□ 0.83
CDKN1AP38936 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN1AP38936 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN1AP38936 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN1AP38936 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN1AP38936 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CDKN1AP38936 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.24■□□□□ 0.83
CDKN1AP38936 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN1AP38936 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN1AP38936 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN1AP38936 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKN1AP38936 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDKN1AP38936 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKN1AP38936 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDKN1AP38936 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKN1AP38936 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKN1AP38936 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.23■□□□□ 0.83
CDKN1AP38936 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKN1AP38936 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKN1AP38936 AC021242.3-201ENST00000607598 1377 ntBASIC20.22■□□□□ 0.83
CDKN1AP38936 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CDKN1AP38936 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKN1AP38936 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
CDKN1AP38936 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.22■□□□□ 0.83
CDKN1AP38936 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKN1AP38936 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKN1AP38936 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKN1AP38936 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKN1AP38936 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
CDKN1AP38936 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.21■□□□□ 0.83
CDKN1AP38936 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.21■□□□□ 0.83
CDKN1AP38936 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKN1AP38936 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.21■□□□□ 0.83
CDKN1AP38936 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.2■□□□□ 0.82
CDKN1AP38936 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.2■□□□□ 0.82
CDKN1AP38936 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN1AP38936 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.2■□□□□ 0.82
CDKN1AP38936 MIR4281-201ENST00000580852 62 ntBASIC20.2■□□□□ 0.82
CDKN1AP38936 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN1AP38936 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN1AP38936 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN1AP38936 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.2■□□□□ 0.82
CDKN1AP38936 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDKN1AP38936 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDKN1AP38936 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKN1AP38936 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CDKN1AP38936 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.18■□□□□ 0.82
CDKN1AP38936 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDKN1AP38936 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.18■□□□□ 0.82
CDKN1AP38936 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKN1AP38936 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.18■□□□□ 0.82
CDKN1AP38936 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CDKN1AP38936 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.17■□□□□ 0.82
CDKN1AP38936 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.17■□□□□ 0.82
CDKN1AP38936 AC092028.1-203ENST00000608262 953 ntBASIC20.17■□□□□ 0.82
CDKN1AP38936 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CDKN1AP38936 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CDKN1AP38936 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.17■□□□□ 0.82
CDKN1AP38936 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CDKN1AP38936 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDKN1AP38936 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.16■□□□□ 0.82
CDKN1AP38936 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CDKN1AP38936 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.16■□□□□ 0.82
CDKN1AP38936 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.16■□□□□ 0.82
CDKN1AP38936 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDKN1AP38936 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDKN1AP38936 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms