Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC142472.1-201ENST00000612013 1741 ntBASIC30.34■■■□□ 2.45
RFC4P35249 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.34■■■□□ 2.45
RFC4P35249 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.34■■■□□ 2.45
RFC4P35249 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RFC4P35249 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
RFC4P35249 AC133561.4-201ENST00000566112 224 ntBASIC30.33■■■□□ 2.45
RFC4P35249 AC011551.1-201ENST00000614101 683 ntBASIC30.33■■■□□ 2.45
RFC4P35249 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RFC4P35249 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RFC4P35249 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
RFC4P35249 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RFC4P35249 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.32■■■□□ 2.44
RFC4P35249 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
RFC4P35249 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.32■■■□□ 2.44
RFC4P35249 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RFC4P35249 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
RFC4P35249 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.31■■■□□ 2.44
RFC4P35249 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC30.31■■■□□ 2.44
RFC4P35249 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
RFC4P35249 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RFC4P35249 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
RFC4P35249 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
RFC4P35249 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC30.3■■■□□ 2.44
RFC4P35249 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RFC4P35249 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RFC4P35249 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
RFC4P35249 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.29■■■□□ 2.44
RFC4P35249 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
RFC4P35249 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RFC4P35249 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
RFC4P35249 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.28■■■□□ 2.44
RFC4P35249 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC30.28■■■□□ 2.44
RFC4P35249 AL512631.2-201ENST00000604634 923 ntBASIC30.28■■■□□ 2.44
RFC4P35249 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
RFC4P35249 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.27■■■□□ 2.44
RFC4P35249 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RFC4P35249 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RFC4P35249 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RFC4P35249 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
RFC4P35249 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC30.26■■■□□ 2.43
RFC4P35249 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RFC4P35249 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.26■■■□□ 2.43
RFC4P35249 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.26■■■□□ 2.43
RFC4P35249 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
RFC4P35249 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
RFC4P35249 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RFC4P35249 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RFC4P35249 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
RFC4P35249 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RFC4P35249 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
RFC4P35249 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RFC4P35249 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
RFC4P35249 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC30.23■■■□□ 2.43
RFC4P35249 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC30.23■■■□□ 2.43
RFC4P35249 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RFC4P35249 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RFC4P35249 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RFC4P35249 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RFC4P35249 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.22■■■□□ 2.43
RFC4P35249 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.2■■■□□ 2.43
RFC4P35249 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
RFC4P35249 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RFC4P35249 EBPL-204ENST00000378272 766 ntTSL 3 BASIC30.2■■■□□ 2.43
RFC4P35249 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.2■■■□□ 2.43
RFC4P35249 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC30.2■■■□□ 2.43
RFC4P35249 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.2■■■□□ 2.43
RFC4P35249 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
RFC4P35249 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.42
RFC4P35249 GUK1-205ENST00000366722 850 ntTSL 3 BASIC30.19■■■□□ 2.42
RFC4P35249 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
RFC4P35249 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.19■■■□□ 2.42
RFC4P35249 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RFC4P35249 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RFC4P35249 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC30.18■■■□□ 2.42
RFC4P35249 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
RFC4P35249 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
RFC4P35249 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.18■■■□□ 2.42
RFC4P35249 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RFC4P35249 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.17■■■□□ 2.42
RFC4P35249 AP004609.3-201ENST00000610705 1884 ntBASIC30.17■■■□□ 2.42
RFC4P35249 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.17■■■□□ 2.42
RFC4P35249 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.17■■■□□ 2.42
RFC4P35249 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
RFC4P35249 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
RFC4P35249 ZNRF2P3-201ENST00000424200 374 ntBASIC30.16■■■□□ 2.42
RFC4P35249 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
RFC4P35249 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.16■■■□□ 2.42
RFC4P35249 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.16■■■□□ 2.42
RFC4P35249 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RFC4P35249 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RFC4P35249 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.15■■■□□ 2.42
RFC4P35249 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.15■■■□□ 2.42
RFC4P35249 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
RFC4P35249 PBX2P1-201ENST00000493219 1291 ntBASIC30.15■■■□□ 2.42
RFC4P35249 AC106739.1-201ENST00000617035 715 ntBASIC30.15■■■□□ 2.42
RFC4P35249 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RFC4P35249 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.15■■■□□ 2.42
RFC4P35249 AF131216.4-201ENST00000638924 1588 ntBASIC30.15■■■□□ 2.42
RFC4P35249 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
RFC4P35249 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms