Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.89■□□□□ 0.45
Tnfrsf1aP25118 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.89■□□□□ 0.45
Tnfrsf1aP25118 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Tnfrsf1aP25118 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.89■□□□□ 0.45
Tnfrsf1aP25118 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1aP25118 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1aP25118 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfrsf1aP25118 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.89■□□□□ 0.45
Tnfrsf1aP25118 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfrsf1aP25118 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Tnfrsf1aP25118 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Tnfrsf1aP25118 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Tnfrsf1aP25118 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.88■□□□□ 0.45
Tnfrsf1aP25118 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfrsf1aP25118 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfrsf1aP25118 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfrsf1aP25118 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Tnfrsf1aP25118 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Tnfrsf1aP25118 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf1aP25118 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf1aP25118 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf1aP25118 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf1aP25118 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf1aP25118 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf1aP25118 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf1aP25118 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf1aP25118 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf1aP25118 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Tnfrsf1aP25118 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf1aP25118 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf1aP25118 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf1aP25118 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf1aP25118 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf1aP25118 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.84■□□□□ 0.45
Tnfrsf1aP25118 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf1aP25118 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tnfrsf1aP25118 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf1aP25118 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf1aP25118 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf1aP25118 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf1aP25118 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.83■□□□□ 0.45
Tnfrsf1aP25118 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
Tnfrsf1aP25118 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfrsf1aP25118 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfrsf1aP25118 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf1aP25118 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf1aP25118 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf1aP25118 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf1aP25118 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf1aP25118 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf1aP25118 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf1aP25118 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf1aP25118 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
Tnfrsf1aP25118 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Tnfrsf1aP25118 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf1aP25118 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf1aP25118 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf1aP25118 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf1aP25118 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.81■□□□□ 0.44
Tnfrsf1aP25118 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.81■□□□□ 0.44
Tnfrsf1aP25118 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.81■□□□□ 0.44
Tnfrsf1aP25118 Gm27502-201ENSMUST00000183495 199 ntBASIC17.81■□□□□ 0.44
Tnfrsf1aP25118 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.81■□□□□ 0.44
Tnfrsf1aP25118 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf1aP25118 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf1aP25118 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf1aP25118 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Gm11175-201ENSMUST00000116172 543 ntBASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf1aP25118 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf1aP25118 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf1aP25118 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tnfrsf1aP25118 Mir6538-201ENSMUST00000183713 110 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 8084.9 ms