Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF1AP19438 YBX1P4-201ENST00000392794 808 ntBASIC20.13■□□□□ 0.81
TNFRSF1AP19438 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF1AP19438 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF1AP19438 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF1AP19438 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.12■□□□□ 0.81
TNFRSF1AP19438 AC022616.5-201ENST00000518796 181 ntBASIC20.12■□□□□ 0.81
TNFRSF1AP19438 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFRSF1AP19438 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TNFRSF1AP19438 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFRSF1AP19438 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFRSF1AP19438 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF1AP19438 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF1AP19438 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFRSF1AP19438 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFRSF1AP19438 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF1AP19438 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFRSF1AP19438 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFRSF1AP19438 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFRSF1AP19438 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF1AP19438 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFRSF1AP19438 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFRSF1AP19438 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF1AP19438 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF1AP19438 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF1AP19438 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
TNFRSF1AP19438 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.09■□□□□ 0.81
TNFRSF1AP19438 MIR4508-201ENST00000584178 70 ntBASIC20.09■□□□□ 0.81
TNFRSF1AP19438 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF1AP19438 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF1AP19438 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF1AP19438 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
TNFRSF1AP19438 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF1AP19438 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF1AP19438 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TNFRSF1AP19438 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFRSF1AP19438 AL592295.1-201ENST00000400984 884 ntBASIC20.08■□□□□ 0.81
TNFRSF1AP19438 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFRSF1AP19438 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TNFRSF1AP19438 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFRSF1AP19438 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNFRSF1AP19438 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.8
TNFRSF1AP19438 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFRSF1AP19438 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFRSF1AP19438 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TNFRSF1AP19438 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
TNFRSF1AP19438 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFRSF1AP19438 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.07■□□□□ 0.8
TNFRSF1AP19438 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TNFRSF1AP19438 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.06■□□□□ 0.8
TNFRSF1AP19438 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFRSF1AP19438 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFRSF1AP19438 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TNFRSF1AP19438 KRT8P33-201ENST00000508125 1423 ntBASIC20.06■□□□□ 0.8
TNFRSF1AP19438 PVT1_1.1-201ENST00000615125 194 ntBASIC20.06■□□□□ 0.8
TNFRSF1AP19438 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.06■□□□□ 0.8
TNFRSF1AP19438 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFRSF1AP19438 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TNFRSF1AP19438 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.05■□□□□ 0.8
TNFRSF1AP19438 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF1AP19438 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TNFRSF1AP19438 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF1AP19438 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF1AP19438 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF1AP19438 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF1AP19438 RARRES2P1-201ENST00000474487 481 ntBASIC20.04■□□□□ 0.8
TNFRSF1AP19438 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.04■□□□□ 0.8
TNFRSF1AP19438 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
TNFRSF1AP19438 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1AP19438 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1AP19438 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.03■□□□□ 0.8
TNFRSF1AP19438 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1AP19438 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1AP19438 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1AP19438 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TNFRSF1AP19438 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1AP19438 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1AP19438 FOXO3B-201ENST00000395675 1928 ntBASIC20.02■□□□□ 0.8
TNFRSF1AP19438 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.02■□□□□ 0.8
TNFRSF1AP19438 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
TNFRSF1AP19438 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1AP19438 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1AP19438 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.02■□□□□ 0.8
TNFRSF1AP19438 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1AP19438 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.02■□□□□ 0.8
TNFRSF1AP19438 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNFRSF1AP19438 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNFRSF1AP19438 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TNFRSF1AP19438 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.02■□□□□ 0.79
TNFRSF1AP19438 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF1AP19438 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TNFRSF1AP19438 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
TNFRSF1AP19438 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF1AP19438 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF1AP19438 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TNFRSF1AP19438 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF1AP19438 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF1AP19438 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF1AP19438 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF1AP19438 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms