Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 ATG22YCL038C 1587 nt5.5□□□□□ -1.53
RPL40BP0CH09 YOS9YDR057W 1629 nt5.49□□□□□ -1.53
RPL40BP0CH09 ASN2YGR124W 1719 nt5.49□□□□□ -1.53
RPL40BP0CH09 YDR154CYDR154C 351 nt5.49□□□□□ -1.53
RPL40BP0CH09 YGR127WYGR127W 939 nt5.49□□□□□ -1.53
RPL40BP0CH09 YJR115WYJR115W 510 nt5.49□□□□□ -1.53
RPL40BP0CH09 YJU3YKL094W 942 nt5.49□□□□□ -1.53
RPL40BP0CH09 YMR111CYMR111C 1389 nt5.49□□□□□ -1.53
RPL40BP0CH09 MLF3YNL074C 1359 nt5.49□□□□□ -1.53
RPL40BP0CH09 RPT2YDL007W 1314 nt5.48□□□□□ -1.53
RPL40BP0CH09 FET4YMR319C 1659 nt5.48□□□□□ -1.53
RPL40BP0CH09 HAP3YBL021C 435 nt5.48□□□□□ -1.53
RPL40BP0CH09 VPS5YOR069W 2028 nt5.48□□□□□ -1.53
RPL40BP0CH09 MRC1YCL061C 3291 nt5.48□□□□□ -1.53
RPL40BP0CH09 TDA6YPR157W 1404 nt5.48□□□□□ -1.53
RPL40BP0CH09 RAD24YER173W 1980 nt5.47□□□□□ -1.53
RPL40BP0CH09 VHT1YGR065C 1782 nt5.47□□□□□ -1.53
RPL40BP0CH09 GET3YDL100C 1065 nt5.47□□□□□ -1.53
RPL40BP0CH09 YEL068CYEL068C 333 nt5.47□□□□□ -1.53
RPL40BP0CH09 QCR8YJL166W 285 nt5.47□□□□□ -1.53
RPL40BP0CH09 YPR123CYPR123C 435 nt5.47□□□□□ -1.53
RPL40BP0CH09 YBR144CYBR144C 315 nt5.47□□□□□ -1.53
RPL40BP0CH09 PRP24YMR268C 1335 nt5.47□□□□□ -1.53
RPL40BP0CH09 YHL017WYHL017W 1599 nt5.46□□□□□ -1.53
RPL40BP0CH09 RTT106YNL206C 1368 nt5.46□□□□□ -1.54
RPL40BP0CH09 COA1YIL157C 594 nt5.46□□□□□ -1.54
RPL40BP0CH09 MTC5YDR128W 3447 nt5.46□□□□□ -1.54
RPL40BP0CH09 CLB2YPR119W 1476 nt5.45□□□□□ -1.54
RPL40BP0CH09 PGK1YCR012W 1251 nt5.45□□□□□ -1.54
RPL40BP0CH09 YDR053WYDR053W 396 nt5.45□□□□□ -1.54
RPL40BP0CH09 YDR278CYDR278C 318 nt5.45□□□□□ -1.54
RPL40BP0CH09 IES2YNL215W 963 nt5.45□□□□□ -1.54
RPL40BP0CH09 QNS1YHR074W 2145 nt5.45□□□□□ -1.54
RPL40BP0CH09 YOL036WYOL036W 2286 nt5.45□□□□□ -1.54
RPL40BP0CH09 LAS21YJL062W 2493 nt5.45□□□□□ -1.54
RPL40BP0CH09 RRP4YHR069C 1080 nt5.44□□□□□ -1.54
RPL40BP0CH09 MRS1YIR021W 1092 nt5.44□□□□□ -1.54
RPL40BP0CH09 ERP2YAL007C 648 nt5.44□□□□□ -1.54
RPL40BP0CH09 EFM3YJR129C 1020 nt5.44□□□□□ -1.54
RPL40BP0CH09 TSA1YML028W 591 nt5.44□□□□□ -1.54
RPL40BP0CH09 YMR105W-AYMR105W-A 195 nt5.44□□□□□ -1.54
RPL40BP0CH09 GLN1YPR035W 1113 nt5.44□□□□□ -1.54
RPL40BP0CH09 YBR230W-AYBR230W-A 201 nt5.44□□□□□ -1.54
RPL40BP0CH09 YCL065WYCL065W 369 nt5.43□□□□□ -1.54
RPL40BP0CH09 YML083CYML083C 1257 nt5.43□□□□□ -1.54
RPL40BP0CH09 SHM1YBR263W 1473 nt5.43□□□□□ -1.54
RPL40BP0CH09 YCR097W-AYCR097W-A 267 nt5.42□□□□□ -1.54
RPL40BP0CH09 YRA1YDR381W 681 nt5.42□□□□□ -1.54
RPL40BP0CH09 THI4YGR144W 981 nt5.42□□□□□ -1.54
RPL40BP0CH09 RPB4YJL140W 666 nt5.42□□□□□ -1.54
RPL40BP0CH09 POP3YNL282W 588 nt5.42□□□□□ -1.54
RPL40BP0CH09 BBP1YPL255W 1158 nt5.42□□□□□ -1.54
RPL40BP0CH09 RPL21AYBR191W 483 nt5.42□□□□□ -1.54
RPL40BP0CH09 EXG1YLR300W 1347 nt5.42□□□□□ -1.54
RPL40BP0CH09 PDR18YNR070W 4002 nt5.42□□□□□ -1.54
RPL40BP0CH09 MMP1YLL061W 1752 nt5.42□□□□□ -1.54
RPL40BP0CH09 GWT1YJL091C 1473 nt5.41□□□□□ -1.54
RPL40BP0CH09 KTR1YOR099W 1182 nt5.41□□□□□ -1.54
RPL40BP0CH09 YFL042CYFL042C 2025 nt5.41□□□□□ -1.54
RPL40BP0CH09 VPS4YPR173C 1314 nt5.41□□□□□ -1.54
RPL40BP0CH09 YKE4YIL023C 1041 nt5.4□□□□□ -1.54
RPL40BP0CH09 RPS9AYPL081W 594 nt5.4□□□□□ -1.54
RPL40BP0CH09 BZZ1YHR114W 1902 nt5.39□□□□□ -1.55
RPL40BP0CH09 YDL114WYDL114W 927 nt5.39□□□□□ -1.55
RPL40BP0CH09 YPR114WYPR114W 948 nt5.39□□□□□ -1.55
RPL40BP0CH09 AMA1YGR225W 1782 nt5.39□□□□□ -1.55
RPL40BP0CH09 DIT2YDR402C 1470 nt5.39□□□□□ -1.55
RPL40BP0CH09 HXK2YGL253W 1461 nt5.39□□□□□ -1.55
RPL40BP0CH09 HSX1tR(CCU)J 72 nt5.38□□□□□ -1.55
RPL40BP0CH09 POP5YAL033W 522 nt5.38□□□□□ -1.55
RPL40BP0CH09 TFS1YLR178C 660 nt5.38□□□□□ -1.55
RPL40BP0CH09 YOL163WYOL163W 510 nt5.38□□□□□ -1.55
RPL40BP0CH09 MET8YBR213W 825 nt5.38□□□□□ -1.55
RPL40BP0CH09 PTK2YJR059W 2457 nt5.38□□□□□ -1.55
RPL40BP0CH09 GPB2YAL056W 2643 nt5.38□□□□□ -1.55
RPL40BP0CH09 RPL7AYGL076C 735 nt5.37□□□□□ -1.55
RPL40BP0CH09 YIR042CYIR042C 711 nt5.37□□□□□ -1.55
RPL40BP0CH09 VPS1YKR001C 2115 nt5.37□□□□□ -1.55
RPL40BP0CH09 RPL7BYPL198W 735 nt5.37□□□□□ -1.55
RPL40BP0CH09 YMC1YPR058W 924 nt5.37□□□□□ -1.55
RPL40BP0CH09 PAT1YCR077C 2391 nt5.37□□□□□ -1.55
RPL40BP0CH09 YHR131CYHR131C 2553 nt5.36□□□□□ -1.55
RPL40BP0CH09 HRQ1YDR291W 3234 nt5.36□□□□□ -1.55
RPL40BP0CH09 MNN5YJL186W 1761 nt5.36□□□□□ -1.55
RPL40BP0CH09 DAL4YIR028W 1908 nt5.36□□□□□ -1.55
RPL40BP0CH09 KEX2YNL238W 2445 nt5.35□□□□□ -1.55
RPL40BP0CH09 ALD6YPL061W 1503 nt5.34□□□□□ -1.55
RPL40BP0CH09 WHI2YOR043W 1461 nt5.34□□□□□ -1.55
RPL40BP0CH09 YGL235WYGL235W 537 nt5.34□□□□□ -1.55
RPL40BP0CH09 PET112YBL080C 1626 nt5.34□□□□□ -1.56
RPL40BP0CH09 ORC5YNL261W 1440 nt5.33□□□□□ -1.56
RPL40BP0CH09 CAD1YDR423C 1230 nt5.33□□□□□ -1.56
RPL40BP0CH09 YGL088WYGL088W 366 nt5.33□□□□□ -1.56
RPL40BP0CH09 PHB1YGR132C 864 nt5.33□□□□□ -1.56
RPL40BP0CH09 RPP0YLR340W 939 nt5.33□□□□□ -1.56
RPL40BP0CH09 NHP6BYBR089C-A 300 nt5.33□□□□□ -1.56
RPL40BP0CH09 EXO70YJL085W 1872 nt5.32□□□□□ -1.56
RPL40BP0CH09 VMA13YPR036W 1437 nt5.32□□□□□ -1.56
RPL40BP0CH09 TEP1YNL128W 1305 nt5.32□□□□□ -1.56
RPL40BP0CH09 ENT5YDR153C 1236 nt5.32□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 73.8 ms